Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.53□□□□□ -0.08
PHACTR1Q9C0D0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PHACTR1Q9C0D0 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PHACTR1Q9C0D0 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PHACTR1Q9C0D0 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PHACTR1Q9C0D0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PHACTR1Q9C0D0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PHACTR1Q9C0D0 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PHACTR1Q9C0D0 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PHACTR1Q9C0D0 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PHACTR1Q9C0D0 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PHACTR1Q9C0D0 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 DGCR5-201ENST00000399539 862 ntBASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 RBM8B-201ENST00000555532 525 ntBASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 DUX4L46-201ENST00000566845 751 ntBASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 AC124068.2-201ENST00000569473 1109 ntBASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 MIR6720-201ENST00000611664 98 ntBASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 POM121L4P-202ENST00000427789 1891 ntBASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
PHACTR1Q9C0D0 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 AC006001.1-201ENST00000325130 474 ntBASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 AC112492.5-201ENST00000421897 457 ntBASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 LINC02084-201ENST00000606069 1096 ntBASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 AL591471.1-201ENST00000621855 229 ntBASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms