Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 AL512306.1-201ENST00000432698 848 ntBASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 AC012362.1-201ENST00000434906 739 ntBASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 AC138701.2-201ENST00000553634 226 ntBASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 NUDT4P2-201ENST00000578341 546 ntBASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 AC005041.3-201ENST00000606287 649 ntBASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 AC009084.3-201ENST00000623356 437 ntBASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHKBP1Q8TBC3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SHKBP1Q8TBC3 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHKBP1Q8TBC3 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.96□□□□□ -0.02
SHKBP1Q8TBC3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHKBP1Q8TBC3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
SHKBP1Q8TBC3 AC126755.1-201ENST00000525846 6405 ntBASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 CYP51A1P3-201ENST00000400072 1428 ntBASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 AL627389.1-201ENST00000413508 1182 ntBASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 RN7SL818P-201ENST00000485099 259 ntBASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 AP000911.2-201ENST00000534330 502 ntBASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 RN7SL725P-201ENST00000606439 259 ntBASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 AC009145.4-201ENST00000625119 1294 ntBASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 HLA-C-210ENST00000640219 976 ntBASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SHKBP1Q8TBC3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHKBP1Q8TBC3 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms