Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 RPL35P9-201ENST00000446059 350 ntBASIC21.81■■□□□ 1.08
VPS8Q8N3P4 MT2A-202ENST00000561491 581 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 AC138466.5-201ENST00000624002 808 ntBASIC21.81■■□□□ 1.08
VPS8Q8N3P4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS8Q8N3P4 AC020917.4-201ENST00000623994 1999 ntBASIC21.81■■□□□ 1.08
VPS8Q8N3P4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 AL627389.1-201ENST00000413508 1182 ntBASIC21.8■■□□□ 1.08
VPS8Q8N3P4 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 GNG10P1-201ENST00000452289 199 ntBASIC21.8■■□□□ 1.08
VPS8Q8N3P4 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 AC117489.1-201ENST00000625169 3217 ntBASIC21.8■■□□□ 1.08
VPS8Q8N3P4 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 AC024075.2-201ENST00000598112 1473 ntBASIC21.8■■□□□ 1.08
VPS8Q8N3P4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 SSR4-202ENST00000370085 526 ntTSL 2 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 AC012362.1-201ENST00000434906 739 ntBASIC21.8■■□□□ 1.08
VPS8Q8N3P4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC21.8■■□□□ 1.08
VPS8Q8N3P4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 TSPY26P-202ENST00000565928 3884 ntBASIC21.79■■□□□ 1.08
VPS8Q8N3P4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 ACTBP14-201ENST00000411655 1089 ntBASIC21.79■■□□□ 1.08
VPS8Q8N3P4 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 RPS23-207ENST00000511844 530 ntTSL 2 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 DLK1-205ENST00000556051 469 ntTSL 2 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms