Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
RNF135Q8IUD6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 MTATP6P19-201ENST00000413797 659 ntBASIC15.18■□□□□ 0.02
RNF135Q8IUD6 AL645933.1-201ENST00000440087 609 ntBASIC15.18■□□□□ 0.02
RNF135Q8IUD6 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 AC244197.1-201ENST00000456494 951 ntBASIC15.18■□□□□ 0.02
RNF135Q8IUD6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF135Q8IUD6 AC007191.1-201ENST00000623179 2995 ntBASIC15.18■□□□□ 0.02
RNF135Q8IUD6 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 MARK2P16-201ENST00000605714 1723 ntBASIC15.17■□□□□ 0.02
RNF135Q8IUD6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 AC018442.1-201ENST00000421439 2061 ntBASIC15.17■□□□□ 0.02
RNF135Q8IUD6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 XBP1P1-201ENST00000436573 652 ntBASIC15.17■□□□□ 0.02
RNF135Q8IUD6 RNA5SP417-201ENST00000516459 108 ntBASIC15.17■□□□□ 0.02
RNF135Q8IUD6 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF135Q8IUD6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms