Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 AC005077.2-201ENST00000449786 690 ntBASIC12.93□□□□□ -0.34
ATG4DQ86TL0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 IGHJ2P-201ENST00000454480 60 ntBASIC12.93□□□□□ -0.34
ATG4DQ86TL0 AKR7A2P1-201ENST00000460134 915 ntBASIC12.93□□□□□ -0.34
ATG4DQ86TL0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 AC126915.1-201ENST00000522847 1038 ntBASIC12.93□□□□□ -0.34
ATG4DQ86TL0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 AC013355.1-201ENST00000562625 723 ntBASIC12.93□□□□□ -0.34
ATG4DQ86TL0 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 AL157813.1-201ENST00000612996 587 ntBASIC12.93□□□□□ -0.34
ATG4DQ86TL0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 MARK2P9-201ENST00000430958 1727 ntBASIC12.92□□□□□ -0.34
ATG4DQ86TL0 CALR4P-201ENST00000431943 946 ntBASIC12.92□□□□□ -0.34
ATG4DQ86TL0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 AC091804.1-201ENST00000486888 567 ntBASIC12.92□□□□□ -0.34
ATG4DQ86TL0 AC005740.2-201ENST00000511085 419 ntBASIC12.92□□□□□ -0.34
ATG4DQ86TL0 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 CR392039.2-201ENST00000623182 509 ntBASIC12.92□□□□□ -0.34
ATG4DQ86TL0 AC244452.3-201ENST00000636814 210 ntBASIC12.92□□□□□ -0.34
ATG4DQ86TL0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATG4DQ86TL0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms