Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AC152010.1-201ENST00000415779 2006 ntBASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 MAGEA7P-201ENST00000436482 942 ntBASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AC007679.1-201ENST00000458609 502 ntBASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 NME1-209ENST00000511355 1645 ntTSL 5 BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 SERF2-204ENST00000402131 586 ntTSL 2 BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 AL121994.1-201ENST00000413189 402 ntBASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 AC023051.2-201ENST00000541141 460 ntBASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 AC142086.5-202ENST00000562500 217 ntBASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42BPAQ5VT25 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 RN7SL440P-201ENST00000577855 343 ntBASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 COCH-203ENST00000460581 2688 ntTSL 2 BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42BPAQ5VT25 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 SNORA50D-201ENST00000408059 134 ntBASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 CDKN2A-AS1-201ENST00000441769 823 ntBASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms