Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
CDK5Q00535 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.88□□□□□ -0.35
CDK5Q00535 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.88□□□□□ -0.35
CDK5Q00535 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CDK5Q00535 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.88□□□□□ -0.35
CDK5Q00535 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CDK5Q00535 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CDK5Q00535 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.88□□□□□ -0.35
CDK5Q00535 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.88□□□□□ -0.35
CDK5Q00535 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.88□□□□□ -0.35
CDK5Q00535 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CDK5Q00535 CYMP-203ENST00000474680 1263 ntBASIC12.88□□□□□ -0.35
CDK5Q00535 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.88□□□□□ -0.35
CDK5Q00535 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.88□□□□□ -0.35
CDK5Q00535 RBM8B-201ENST00000555532 525 ntBASIC12.88□□□□□ -0.35
CDK5Q00535 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.88□□□□□ -0.35
CDK5Q00535 AC124068.2-201ENST00000569473 1109 ntBASIC12.88□□□□□ -0.35
CDK5Q00535 RN7SL204P-201ENST00000582831 262 ntBASIC12.88□□□□□ -0.35
CDK5Q00535 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.88□□□□□ -0.35
CDK5Q00535 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 KRT8P4-201ENST00000509735 1454 ntBASIC12.88□□□□□ -0.35
CDK5Q00535 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CDK5Q00535 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 AC020917.4-201ENST00000623994 1999 ntBASIC12.88□□□□□ -0.35
CDK5Q00535 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.88□□□□□ -0.35
CDK5Q00535 AL031719.1-201ENST00000623365 2587 ntBASIC12.88□□□□□ -0.35
CDK5Q00535 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CDK5Q00535 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.88□□□□□ -0.35
CDK5Q00535 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.88□□□□□ -0.35
CDK5Q00535 AC073862.5-201ENST00000624129 2027 ntBASIC12.88□□□□□ -0.35
CDK5Q00535 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 AL354989.2-201ENST00000435838 1540 ntBASIC12.88□□□□□ -0.35
CDK5Q00535 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CDK5Q00535 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.87□□□□□ -0.35
CDK5Q00535 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CDK5Q00535 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 MEX3B-202ENST00000558133 4333 ntBASIC12.87□□□□□ -0.35
CDK5Q00535 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.87□□□□□ -0.35
CDK5Q00535 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.87□□□□□ -0.35
CDK5Q00535 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.87□□□□□ -0.35
CDK5Q00535 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CDK5Q00535 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CDK5Q00535 CNN2P8-201ENST00000421872 913 ntBASIC12.87□□□□□ -0.35
CDK5Q00535 AL355994.2-201ENST00000447882 704 ntBASIC12.87□□□□□ -0.35
CDK5Q00535 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CDK5Q00535 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.87□□□□□ -0.35
CDK5Q00535 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.87□□□□□ -0.35
CDK5Q00535 AC022217.1-201ENST00000521069 738 ntBASIC12.87□□□□□ -0.35
CDK5Q00535 AC190387.1-201ENST00000551683 408 ntBASIC12.87□□□□□ -0.35
CDK5Q00535 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.87□□□□□ -0.35
CDK5Q00535 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.87□□□□□ -0.35
CDK5Q00535 DUX4L46-201ENST00000566845 751 ntBASIC12.87□□□□□ -0.35
CDK5Q00535 MIR6720-201ENST00000611664 98 ntBASIC12.87□□□□□ -0.35
CDK5Q00535 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.87□□□□□ -0.35
CDK5Q00535 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.87□□□□□ -0.35
CDK5Q00535 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.87□□□□□ -0.35
CDK5Q00535 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CDK5Q00535 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.87□□□□□ -0.35
CDK5Q00535 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDK5Q00535 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms