Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CXCR4P61073 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCR4P61073 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.03□□□□□ -0.32
CXCR4P61073 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.03□□□□□ -0.32
CXCR4P61073 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.03□□□□□ -0.32
CXCR4P61073 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC13.03□□□□□ -0.32
CXCR4P61073 AC110048.1-201ENST00000604293 2157 ntBASIC13.03□□□□□ -0.32
CXCR4P61073 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CXCR4P61073 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCR4P61073 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 ACKR1-201ENST00000368121 1240 ntBASIC13.03□□□□□ -0.32
CXCR4P61073 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCR4P61073 SNORA50C-201ENST00000408535 133 ntBASIC13.03□□□□□ -0.32
CXCR4P61073 AC098850.1-201ENST00000419919 790 ntBASIC13.03□□□□□ -0.32
CXCR4P61073 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.03□□□□□ -0.32
CXCR4P61073 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 KRT18P15-201ENST00000458108 1291 ntBASIC13.03□□□□□ -0.32
CXCR4P61073 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCR4P61073 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.03□□□□□ -0.32
CXCR4P61073 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.03□□□□□ -0.32
CXCR4P61073 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.03□□□□□ -0.32
CXCR4P61073 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCR4P61073 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.03□□□□□ -0.32
CXCR4P61073 AC023511.2-201ENST00000618803 211 ntBASIC13.03□□□□□ -0.32
CXCR4P61073 SNORA50.1-201ENST00000628590 135 ntBASIC13.03□□□□□ -0.32
CXCR4P61073 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CXCR4P61073 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCR4P61073 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
CXCR4P61073 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CXCR4P61073 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CXCR4P61073 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCR4P61073 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
CXCR4P61073 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CXCR4P61073 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCR4P61073 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCR4P61073 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCR4P61073 AC005014.1-201ENST00000432006 2976 ntBASIC13.02□□□□□ -0.32
CXCR4P61073 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CXCR4P61073 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCR4P61073 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
CXCR4P61073 AC022364.1-202ENST00000617468 2409 ntBASIC13.02□□□□□ -0.32
CXCR4P61073 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCR4P61073 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CXCR4P61073 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCR4P61073 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCR4P61073 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
CXCR4P61073 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCR4P61073 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCR4P61073 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.02□□□□□ -0.32
CXCR4P61073 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCR4P61073 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCR4P61073 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCR4P61073 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCR4P61073 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCR4P61073 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CXCR4P61073 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.02□□□□□ -0.33
CXCR4P61073 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.02□□□□□ -0.33
CXCR4P61073 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.02□□□□□ -0.33
CXCR4P61073 MYCLP2-201ENST00000449268 967 ntBASIC13.02□□□□□ -0.33
CXCR4P61073 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCR4P61073 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.02□□□□□ -0.33
CXCR4P61073 ENPP7P5-201ENST00000541031 1031 ntBASIC13.02□□□□□ -0.33
CXCR4P61073 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.02□□□□□ -0.33
CXCR4P61073 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.02□□□□□ -0.33
CXCR4P61073 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CXCR4P61073 AC005498.2-205ENST00000593218 784 ntBASIC13.02□□□□□ -0.33
CXCR4P61073 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCR4P61073 TMEM261P1-201ENST00000604899 340 ntBASIC13.02□□□□□ -0.33
CXCR4P61073 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.02□□□□□ -0.33
CXCR4P61073 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CXCR4P61073 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCR4P61073 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CXCR4P61073 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCR4P61073 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCR4P61073 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCR4P61073 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.02□□□□□ -0.33
CXCR4P61073 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCR4P61073 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CXCR4P61073 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCR4P61073 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCR4P61073 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCR4P61073 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC13.02□□□□□ -0.33
CXCR4P61073 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCR4P61073 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.02□□□□□ -0.33
CXCR4P61073 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCR4P61073 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms