Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
WNT3AP56704 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
WNT3AP56704 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.4□□□□□ -0.1
WNT3AP56704 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.4□□□□□ -0.1
WNT3AP56704 AC011742.3-201ENST00000439053 820 ntBASIC14.4□□□□□ -0.1
WNT3AP56704 AK2P2-201ENST00000439142 405 ntBASIC14.4□□□□□ -0.1
WNT3AP56704 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.4□□□□□ -0.1
WNT3AP56704 EIF4HP1-201ENST00000453115 687 ntBASIC14.4□□□□□ -0.1
WNT3AP56704 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.4□□□□□ -0.1
WNT3AP56704 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
WNT3AP56704 AP001258.2-201ENST00000529891 490 ntBASIC14.4□□□□□ -0.1
WNT3AP56704 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.4□□□□□ -0.1
WNT3AP56704 AC093752.3-201ENST00000567343 901 ntBASIC14.4□□□□□ -0.1
WNT3AP56704 MIR3188-201ENST00000583494 85 ntBASIC14.4□□□□□ -0.1
WNT3AP56704 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.4□□□□□ -0.1
WNT3AP56704 AC243960.2-201ENST00000600996 747 ntBASIC14.4□□□□□ -0.1
WNT3AP56704 AL645939.5-201ENST00000606834 243 ntBASIC14.4□□□□□ -0.1
WNT3AP56704 AC026740.1-201ENST00000607068 791 ntBASIC14.4□□□□□ -0.1
WNT3AP56704 AC138649.2-201ENST00000615886 705 ntBASIC14.4□□□□□ -0.1
WNT3AP56704 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
WNT3AP56704 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
WNT3AP56704 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.4□□□□□ -0.1
WNT3AP56704 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.4□□□□□ -0.1
WNT3AP56704 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
WNT3AP56704 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
WNT3AP56704 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.4□□□□□ -0.1
WNT3AP56704 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
WNT3AP56704 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
WNT3AP56704 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.39□□□□□ -0.11
WNT3AP56704 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
WNT3AP56704 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
WNT3AP56704 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 BRD7P5-201ENST00000299197 1822 ntBASIC14.39□□□□□ -0.11
WNT3AP56704 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
WNT3AP56704 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.39□□□□□ -0.11
WNT3AP56704 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.39□□□□□ -0.11
WNT3AP56704 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
WNT3AP56704 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.39□□□□□ -0.11
WNT3AP56704 AC016700.1-201ENST00000429424 312 ntBASIC14.39□□□□□ -0.11
WNT3AP56704 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
WNT3AP56704 RN7SL530P-201ENST00000485097 298 ntBASIC14.39□□□□□ -0.11
WNT3AP56704 AC091804.1-201ENST00000486888 567 ntBASIC14.39□□□□□ -0.11
WNT3AP56704 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.39□□□□□ -0.11
WNT3AP56704 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
WNT3AP56704 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.39□□□□□ -0.11
WNT3AP56704 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.39□□□□□ -0.11
WNT3AP56704 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 AL022334.2-201ENST00000610000 484 ntBASIC14.39□□□□□ -0.11
WNT3AP56704 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.39□□□□□ -0.11
WNT3AP56704 AL805961.1-203ENST00000641078 1258 ntBASIC14.39□□□□□ -0.11
WNT3AP56704 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 LINC01165-201ENST00000445190 1623 ntBASIC14.39□□□□□ -0.11
WNT3AP56704 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
WNT3AP56704 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.39□□□□□ -0.11
WNT3AP56704 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms