Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH4P55283 AL157996.1-201ENST00000624684 2299 ntBASIC14.52□□□□□ -0.08
CDH4P55283 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CDH4P55283 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH4P55283 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH4P55283 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.52□□□□□ -0.09
CDH4P55283 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH4P55283 RNA5SP423-201ENST00000517127 109 ntBASIC14.52□□□□□ -0.09
CDH4P55283 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH4P55283 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH4P55283 RN7SL665P-201ENST00000578793 300 ntBASIC14.52□□□□□ -0.09
CDH4P55283 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH4P55283 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH4P55283 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDH4P55283 AC103810.10-201ENST00000606504 343 ntBASIC14.52□□□□□ -0.09
CDH4P55283 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH4P55283 AL353726.2-201ENST00000623259 884 ntBASIC14.52□□□□□ -0.09
CDH4P55283 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.52□□□□□ -0.09
CDH4P55283 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDH4P55283 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH4P55283 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CDH4P55283 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDH4P55283 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH4P55283 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CDH4P55283 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH4P55283 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH4P55283 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH4P55283 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH4P55283 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH4P55283 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH4P55283 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 TEKT4P2-202ENST00000559466 1312 ntBASIC14.51□□□□□ -0.09
CDH4P55283 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CDH4P55283 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 PPP1R2P4-201ENST00000424051 595 ntBASIC14.51□□□□□ -0.09
CDH4P55283 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH4P55283 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDH4P55283 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH4P55283 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 SLC25A15P3-201ENST00000505530 290 ntBASIC14.51□□□□□ -0.09
CDH4P55283 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH4P55283 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH4P55283 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH4P55283 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.51□□□□□ -0.09
CDH4P55283 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH4P55283 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH4P55283 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDH4P55283 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDH4P55283 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH4P55283 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 AC068760.1-201ENST00000493579 1953 ntBASIC14.51□□□□□ -0.09
CDH4P55283 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.51□□□□□ -0.09
CDH4P55283 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.51□□□□□ -0.09
CDH4P55283 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH4P55283 RCC2P1-201ENST00000452257 1476 ntBASIC14.5□□□□□ -0.09
CDH4P55283 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 MST1P2-201ENST00000457982 2291 ntBASIC14.5□□□□□ -0.09
CDH4P55283 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDH4P55283 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CDH4P55283 LINC02486-201ENST00000604157 3000 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms