Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SLC6A9P48067 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SLC6A9P48067 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.73□□□□□ -0.37
SLC6A9P48067 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.73□□□□□ -0.37
SLC6A9P48067 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 HOMER2P2-201ENST00000451621 847 ntBASIC12.73□□□□□ -0.37
SLC6A9P48067 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.73□□□□□ -0.37
SLC6A9P48067 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
SLC6A9P48067 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.73□□□□□ -0.37
SLC6A9P48067 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.73□□□□□ -0.37
SLC6A9P48067 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.73□□□□□ -0.37
SLC6A9P48067 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.73□□□□□ -0.37
SLC6A9P48067 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.73□□□□□ -0.37
SLC6A9P48067 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.73□□□□□ -0.37
SLC6A9P48067 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
SLC6A9P48067 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.72□□□□□ -0.37
SLC6A9P48067 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 LINC02486-201ENST00000604157 3000 ntBASIC12.72□□□□□ -0.37
SLC6A9P48067 SHC1P1-201ENST00000425230 1745 ntBASIC12.72□□□□□ -0.37
SLC6A9P48067 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.72□□□□□ -0.37
SLC6A9P48067 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.72□□□□□ -0.37
SLC6A9P48067 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.72□□□□□ -0.37
SLC6A9P48067 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.72□□□□□ -0.37
SLC6A9P48067 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 AC079316.1-201ENST00000548397 411 ntBASIC12.72□□□□□ -0.37
SLC6A9P48067 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.72□□□□□ -0.37
SLC6A9P48067 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 AP006547.1-201ENST00000563435 692 ntBASIC12.72□□□□□ -0.37
SLC6A9P48067 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 AC008825.2-201ENST00000603374 718 ntBASIC12.72□□□□□ -0.37
SLC6A9P48067 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC6A9P48067 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SLC6A9P48067 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC6A9P48067 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms