Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
APOBEC1P41238 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
APOBEC1P41238 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.9□□□□□ -0.34
APOBEC1P41238 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.9□□□□□ -0.34
APOBEC1P41238 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.9□□□□□ -0.34
APOBEC1P41238 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 AC239868.1-201ENST00000369385 493 ntBASIC12.9□□□□□ -0.34
APOBEC1P41238 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
APOBEC1P41238 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
APOBEC1P41238 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
APOBEC1P41238 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.9□□□□□ -0.34
APOBEC1P41238 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.9□□□□□ -0.34
APOBEC1P41238 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.9□□□□□ -0.34
APOBEC1P41238 SCARNA20.5-201ENST00000516991 142 ntBASIC12.9□□□□□ -0.34
APOBEC1P41238 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
APOBEC1P41238 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.9□□□□□ -0.34
APOBEC1P41238 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.9□□□□□ -0.34
APOBEC1P41238 AL022334.2-201ENST00000610000 484 ntBASIC12.9□□□□□ -0.34
APOBEC1P41238 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.9□□□□□ -0.34
APOBEC1P41238 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.9□□□□□ -0.34
APOBEC1P41238 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.9□□□□□ -0.34
APOBEC1P41238 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.9□□□□□ -0.34
APOBEC1P41238 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
APOBEC1P41238 AC061965.1-201ENST00000560524 1465 ntBASIC12.9□□□□□ -0.34
APOBEC1P41238 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOBEC1P41238 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
APOBEC1P41238 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
APOBEC1P41238 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
APOBEC1P41238 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 MIR1247-201ENST00000408206 136 ntBASIC12.89□□□□□ -0.35
APOBEC1P41238 GPAA1P2-201ENST00000417923 928 ntBASIC12.89□□□□□ -0.35
APOBEC1P41238 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 AC007274.1-201ENST00000439805 662 ntBASIC12.89□□□□□ -0.35
APOBEC1P41238 AKR7A2P1-201ENST00000460134 915 ntBASIC12.89□□□□□ -0.35
APOBEC1P41238 RN7SL277P-201ENST00000481521 288 ntBASIC12.89□□□□□ -0.35
APOBEC1P41238 CHCHD2P2-201ENST00000503744 321 ntBASIC12.89□□□□□ -0.35
APOBEC1P41238 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.89□□□□□ -0.35
APOBEC1P41238 AC090857.1-201ENST00000527400 390 ntBASIC12.89□□□□□ -0.35
APOBEC1P41238 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.89□□□□□ -0.35
APOBEC1P41238 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.89□□□□□ -0.35
APOBEC1P41238 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.89□□□□□ -0.35
APOBEC1P41238 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.89□□□□□ -0.35
APOBEC1P41238 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.89□□□□□ -0.35
APOBEC1P41238 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
APOBEC1P41238 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.89□□□□□ -0.35
APOBEC1P41238 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOBEC1P41238 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms