Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 AC011498.7-201ENST00000624986 2027 ntBASIC11.01□□□□□ -0.65
RAB4AP20338 AL583810.2-201ENST00000556430 3254 ntBASIC11.01□□□□□ -0.65
RAB4AP20338 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11□□□□□ -0.65
RAB4AP20338 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
RAB4AP20338 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11□□□□□ -0.65
RAB4AP20338 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 AC136604.1-202ENST00000425471 771 ntBASIC11□□□□□ -0.65
RAB4AP20338 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11□□□□□ -0.65
RAB4AP20338 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 KRT18P2-201ENST00000447938 1258 ntBASIC11□□□□□ -0.65
RAB4AP20338 RN7SL589P-201ENST00000481268 310 ntBASIC11□□□□□ -0.65
RAB4AP20338 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11□□□□□ -0.65
RAB4AP20338 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11□□□□□ -0.65
RAB4AP20338 CD63-204ENST00000546939 779 ntTSL 3 BASIC11□□□□□ -0.65
RAB4AP20338 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11□□□□□ -0.65
RAB4AP20338 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11□□□□□ -0.65
RAB4AP20338 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
RAB4AP20338 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 Z83851.2-201ENST00000609564 659 ntBASIC11□□□□□ -0.65
RAB4AP20338 AC012313.10-201ENST00000623509 926 ntBASIC11□□□□□ -0.65
RAB4AP20338 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
RAB4AP20338 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
RAB4AP20338 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 PTCHD1-201ENST00000379361 13714 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
RAB4AP20338 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
RAB4AP20338 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 AL354919.1-201ENST00000453837 2257 ntTSL 2 BASIC11□□□□□ -0.65
RAB4AP20338 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RAB4AP20338 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC10.99□□□□□ -0.65
RAB4AP20338 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC10.99□□□□□ -0.65
RAB4AP20338 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.99□□□□□ -0.65
RAB4AP20338 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
RAB4AP20338 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
RAB4AP20338 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
RAB4AP20338 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC10.99□□□□□ -0.65
RAB4AP20338 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
RAB4AP20338 TUB-202ENST00000305253 6420 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
RAB4AP20338 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RAB4AP20338 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC10.99□□□□□ -0.65
RAB4AP20338 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB4AP20338 SPDYE17-201ENST00000412399 783 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms