Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM21P19474 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM21P19474 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM21P19474 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM21P19474 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM21P19474 PCDHA5-203ENST00000614258 4248 ntBASIC15.83■□□□□ 0.12
TRIM21P19474 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM21P19474 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM21P19474 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM21P19474 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM21P19474 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRIM21P19474 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM21P19474 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM21P19474 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM21P19474 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM21P19474 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM21P19474 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.82■□□□□ 0.12
TRIM21P19474 BNIP3P42-201ENST00000454982 569 ntBASIC15.82■□□□□ 0.12
TRIM21P19474 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.82■□□□□ 0.12
TRIM21P19474 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM21P19474 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRIM21P19474 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM21P19474 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM21P19474 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM21P19474 BNIP3P29-201ENST00000598302 571 ntBASIC15.82■□□□□ 0.12
TRIM21P19474 AC011447.5-201ENST00000616168 564 ntBASIC15.82■□□□□ 0.12
TRIM21P19474 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM21P19474 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM21P19474 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM21P19474 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM21P19474 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM21P19474 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM21P19474 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM21P19474 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM21P19474 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM21P19474 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRIM21P19474 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM21P19474 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRIM21P19474 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRIM21P19474 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRIM21P19474 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 BTBD6P1-201ENST00000412176 1267 ntBASIC15.81■□□□□ 0.12
TRIM21P19474 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM21P19474 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM21P19474 FAM58BP-201ENST00000439056 645 ntBASIC15.81■□□□□ 0.12
TRIM21P19474 MTX1P1-201ENST00000440904 838 ntBASIC15.81■□□□□ 0.12
TRIM21P19474 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM21P19474 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM21P19474 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.81■□□□□ 0.12
TRIM21P19474 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM21P19474 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM21P19474 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM21P19474 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.81■□□□□ 0.12
TRIM21P19474 AC104506.1-201ENST00000609247 429 ntBASIC15.81■□□□□ 0.12
TRIM21P19474 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TRIM21P19474 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM21P19474 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM21P19474 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM21P19474 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRIM21P19474 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM21P19474 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM21P19474 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM21P19474 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms