Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 AC005586.2-201ENST00000563946 837 ntBASIC12.58□□□□□ -0.4
ATF1P18846 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
ATF1P18846 AC025279.2-201ENST00000569730 653 ntBASIC12.58□□□□□ -0.4
ATF1P18846 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.58□□□□□ -0.4
ATF1P18846 AC002472.3-201ENST00000640124 621 ntBASIC12.58□□□□□ -0.4
ATF1P18846 AC009093.10-201ENST00000641956 1442 ntBASIC12.58□□□□□ -0.4
ATF1P18846 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.58□□□□□ -0.4
ATF1P18846 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.58□□□□□ -0.4
ATF1P18846 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.58□□□□□ -0.4
ATF1P18846 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.58□□□□□ -0.4
ATF1P18846 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.58□□□□□ -0.4
ATF1P18846 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.58□□□□□ -0.4
ATF1P18846 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ATF1P18846 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ATF1P18846 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ATF1P18846 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ATF1P18846 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.57□□□□□ -0.4
ATF1P18846 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ATF1P18846 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ATF1P18846 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.57□□□□□ -0.4
ATF1P18846 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.57□□□□□ -0.4
ATF1P18846 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ATF1P18846 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.57□□□□□ -0.4
ATF1P18846 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ATF1P18846 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 AP006294.1-201ENST00000415407 339 ntBASIC12.57□□□□□ -0.4
ATF1P18846 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.57□□□□□ -0.4
ATF1P18846 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.57□□□□□ -0.4
ATF1P18846 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.57□□□□□ -0.4
ATF1P18846 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 AK2P2-201ENST00000439142 405 ntBASIC12.57□□□□□ -0.4
ATF1P18846 TERF1P3-201ENST00000505638 1227 ntBASIC12.57□□□□□ -0.4
ATF1P18846 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
ATF1P18846 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.57□□□□□ -0.4
ATF1P18846 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.57□□□□□ -0.4
ATF1P18846 MIR4745-201ENST00000577608 62 ntBASIC12.57□□□□□ -0.4
ATF1P18846 ECM1P1-201ENST00000604092 1279 ntBASIC12.57□□□□□ -0.4
ATF1P18846 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ATF1P18846 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.57□□□□□ -0.4
ATF1P18846 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ATF1P18846 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
ATF1P18846 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ATF1P18846 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.57□□□□□ -0.4
ATF1P18846 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ATF1P18846 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATF1P18846 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.57□□□□□ -0.4
ATF1P18846 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ATF1P18846 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.56□□□□□ -0.4
ATF1P18846 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.56□□□□□ -0.4
ATF1P18846 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ATF1P18846 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms