Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
NELFEP18615 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
NELFEP18615 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
NELFEP18615 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.22□□□□□ -0.13
NELFEP18615 AL008707.1-201ENST00000422498 534 ntBASIC14.22□□□□□ -0.13
NELFEP18615 IGHJ2P-201ENST00000454480 60 ntBASIC14.22□□□□□ -0.13
NELFEP18615 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.22□□□□□ -0.13
NELFEP18615 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.22□□□□□ -0.13
NELFEP18615 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.22□□□□□ -0.13
NELFEP18615 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.22□□□□□ -0.13
NELFEP18615 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.22□□□□□ -0.13
NELFEP18615 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.22□□□□□ -0.13
NELFEP18615 RN7SL163P-201ENST00000583100 276 ntBASIC14.22□□□□□ -0.13
NELFEP18615 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NELFEP18615 BX088702.1-201ENST00000610784 235 ntBASIC14.22□□□□□ -0.13
NELFEP18615 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.22□□□□□ -0.13
NELFEP18615 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.22□□□□□ -0.13
NELFEP18615 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.22□□□□□ -0.13
NELFEP18615 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NELFEP18615 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.22□□□□□ -0.13
NELFEP18615 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.22□□□□□ -0.13
NELFEP18615 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.22□□□□□ -0.13
NELFEP18615 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.22□□□□□ -0.13
NELFEP18615 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
NELFEP18615 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NELFEP18615 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NELFEP18615 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.21□□□□□ -0.13
NELFEP18615 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 AC004899.1-201ENST00000424687 1714 ntBASIC14.21□□□□□ -0.13
NELFEP18615 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.21□□□□□ -0.13
NELFEP18615 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
NELFEP18615 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NELFEP18615 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
NELFEP18615 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NELFEP18615 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.21□□□□□ -0.13
NELFEP18615 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.21□□□□□ -0.13
NELFEP18615 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.21□□□□□ -0.13
NELFEP18615 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.21□□□□□ -0.13
NELFEP18615 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.21□□□□□ -0.13
NELFEP18615 AC013355.1-201ENST00000562625 723 ntBASIC14.21□□□□□ -0.13
NELFEP18615 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.21□□□□□ -0.13
NELFEP18615 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.21□□□□□ -0.13
NELFEP18615 AC132192.2-201ENST00000596206 1147 ntBASIC14.21□□□□□ -0.13
NELFEP18615 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NELFEP18615 AC068587.10-201ENST00000641210 219 ntBASIC14.21□□□□□ -0.13
NELFEP18615 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.21□□□□□ -0.13
NELFEP18615 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 AL365181.3-201ENST00000605886 3222 ntBASIC14.21□□□□□ -0.13
NELFEP18615 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NELFEP18615 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFEP18615 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NELFEP18615 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NELFEP18615 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
NELFEP18615 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.21□□□□□ -0.14
NELFEP18615 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
NELFEP18615 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.21□□□□□ -0.14
NELFEP18615 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.21□□□□□ -0.14
NELFEP18615 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.21□□□□□ -0.14
NELFEP18615 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NELFEP18615 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.21□□□□□ -0.14
NELFEP18615 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NELFEP18615 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NELFEP18615 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NELFEP18615 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms