Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
DEFA4P12838 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 AC114271.1-201ENST00000612689 2813 ntBASIC11.7□□□□□ -0.54
DEFA4P12838 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.7□□□□□ -0.54
DEFA4P12838 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
DEFA4P12838 AL138725.1-201ENST00000407347 1314 ntBASIC11.7□□□□□ -0.54
DEFA4P12838 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.7□□□□□ -0.54
DEFA4P12838 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.7□□□□□ -0.54
DEFA4P12838 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.7□□□□□ -0.54
DEFA4P12838 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC11.7□□□□□ -0.54
DEFA4P12838 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.7□□□□□ -0.54
DEFA4P12838 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.7□□□□□ -0.54
DEFA4P12838 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.7□□□□□ -0.54
DEFA4P12838 AC138761.1-201ENST00000584393 385 ntBASIC11.7□□□□□ -0.54
DEFA4P12838 AC004466.1-201ENST00000599515 1080 ntBASIC11.7□□□□□ -0.54
DEFA4P12838 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.7□□□□□ -0.54
DEFA4P12838 AC138466.3-201ENST00000619983 221 ntBASIC11.7□□□□□ -0.54
DEFA4P12838 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
DEFA4P12838 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
DEFA4P12838 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.7□□□□□ -0.54
DEFA4P12838 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
DEFA4P12838 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
DEFA4P12838 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
DEFA4P12838 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
DEFA4P12838 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
DEFA4P12838 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.7□□□□□ -0.54
DEFA4P12838 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
DEFA4P12838 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
DEFA4P12838 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 MYADML-201ENST00000474610 2147 ntBASIC11.69□□□□□ -0.54
DEFA4P12838 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.69□□□□□ -0.54
DEFA4P12838 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
DEFA4P12838 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
DEFA4P12838 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 AC010336.1-201ENST00000539278 4739 ntBASIC11.69□□□□□ -0.54
DEFA4P12838 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 CLUHP2-201ENST00000426660 1303 ntBASIC11.69□□□□□ -0.54
DEFA4P12838 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
DEFA4P12838 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC11.69□□□□□ -0.54
DEFA4P12838 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
DEFA4P12838 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
DEFA4P12838 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.69□□□□□ -0.54
DEFA4P12838 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.69□□□□□ -0.54
DEFA4P12838 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 AC131206.1-201ENST00000538078 1211 ntBASIC11.69□□□□□ -0.54
DEFA4P12838 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.69□□□□□ -0.54
DEFA4P12838 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 AL022328.1-201ENST00000610050 478 ntBASIC11.69□□□□□ -0.54
DEFA4P12838 AC132938.4-201ENST00000623835 848 ntBASIC11.69□□□□□ -0.54
DEFA4P12838 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.69□□□□□ -0.54
DEFA4P12838 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
DEFA4P12838 AC072061.1-201ENST00000569710 2234 ntBASIC11.69□□□□□ -0.54
DEFA4P12838 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.69□□□□□ -0.54
DEFA4P12838 AC020910.5-201ENST00000623668 1865 ntBASIC11.69□□□□□ -0.54
DEFA4P12838 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
DEFA4P12838 AC011840.2-201ENST00000563063 1520 ntBASIC11.69□□□□□ -0.54
DEFA4P12838 AC015818.8-201ENST00000587907 1519 ntBASIC11.69□□□□□ -0.54
DEFA4P12838 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms