Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CGB3P0DN86 NCR3-202ENST00000376071 541 ntTSL 5 BASIC11.66□□□□□ -0.54
CGB3P0DN86 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CGB3P0DN86 HNRNPA1P41-201ENST00000397777 928 ntBASIC11.66□□□□□ -0.54
CGB3P0DN86 SLC16A6P1-201ENST00000413214 1059 ntBASIC11.66□□□□□ -0.54
CGB3P0DN86 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
CGB3P0DN86 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC11.66□□□□□ -0.54
CGB3P0DN86 OARD1-212ENST00000482515 832 ntTSL 2 BASIC11.66□□□□□ -0.54
CGB3P0DN86 AC091804.1-201ENST00000486888 567 ntBASIC11.66□□□□□ -0.54
CGB3P0DN86 ZNF767P-206ENST00000513792 565 ntBASIC11.66□□□□□ -0.54
CGB3P0DN86 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.66□□□□□ -0.54
CGB3P0DN86 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.66□□□□□ -0.54
CGB3P0DN86 KRT8P1-201ENST00000557533 1207 ntBASIC11.66□□□□□ -0.54
CGB3P0DN86 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC11.66□□□□□ -0.54
CGB3P0DN86 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
CGB3P0DN86 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CGB3P0DN86 AL805961.1-203ENST00000641078 1258 ntBASIC11.66□□□□□ -0.54
CGB3P0DN86 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CGB3P0DN86 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CGB3P0DN86 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC11.66□□□□□ -0.54
CGB3P0DN86 AL359845.1-201ENST00000458202 1648 ntBASIC11.66□□□□□ -0.54
CGB3P0DN86 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CGB3P0DN86 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CGB3P0DN86 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CGB3P0DN86 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CGB3P0DN86 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CGB3P0DN86 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.66□□□□□ -0.54
CGB3P0DN86 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.66□□□□□ -0.54
CGB3P0DN86 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CGB3P0DN86 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CGB3P0DN86 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.66□□□□□ -0.54
CGB3P0DN86 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CGB3P0DN86 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.66□□□□□ -0.54
CGB3P0DN86 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
CGB3P0DN86 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CGB3P0DN86 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
CGB3P0DN86 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.65□□□□□ -0.54
CGB3P0DN86 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.65□□□□□ -0.54
CGB3P0DN86 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
CGB3P0DN86 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
CGB3P0DN86 FMO6P-201ENST00000236166 1620 ntBASIC11.65□□□□□ -0.54
CGB3P0DN86 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
CGB3P0DN86 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
CGB3P0DN86 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC11.65□□□□□ -0.54
CGB3P0DN86 AC239868.1-201ENST00000369385 493 ntBASIC11.65□□□□□ -0.54
CGB3P0DN86 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC11.65□□□□□ -0.54
CGB3P0DN86 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC11.65□□□□□ -0.54
CGB3P0DN86 DUX4L50-201ENST00000455245 715 ntBASIC11.65□□□□□ -0.54
CGB3P0DN86 AC005740.1-201ENST00000515639 522 ntBASIC11.65□□□□□ -0.54
CGB3P0DN86 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 EMC4-209ENST00000559421 497 ntTSL 2 BASIC11.65□□□□□ -0.54
CGB3P0DN86 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC11.65□□□□□ -0.54
CGB3P0DN86 CENPX-208ENST00000584347 799 ntTSL 2 BASIC11.65□□□□□ -0.54
CGB3P0DN86 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC11.65□□□□□ -0.54
CGB3P0DN86 HPN-206ENST00000597419 1212 ntTSL 5 BASIC11.65□□□□□ -0.54
CGB3P0DN86 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC11.65□□□□□ -0.54
CGB3P0DN86 AC138649.2-201ENST00000615886 705 ntBASIC11.65□□□□□ -0.54
CGB3P0DN86 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC11.65□□□□□ -0.54
CGB3P0DN86 AC100757.4-201ENST00000626934 759 ntBASIC11.65□□□□□ -0.54
CGB3P0DN86 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.65□□□□□ -0.54
CGB3P0DN86 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
CGB3P0DN86 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
CGB3P0DN86 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 AC067931.2-201ENST00000623655 2003 ntBASIC11.65□□□□□ -0.54
CGB3P0DN86 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
CGB3P0DN86 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CGB3P0DN86 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC11.65□□□□□ -0.55
CGB3P0DN86 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
CGB3P0DN86 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CGB3P0DN86 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CGB3P0DN86 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
CGB3P0DN86 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CGB3P0DN86 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CGB3P0DN86 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CGB3P0DN86 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC11.65□□□□□ -0.55
CGB3P0DN86 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.65□□□□□ -0.55
CGB3P0DN86 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
CGB3P0DN86 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
CGB3P0DN86 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CGB3P0DN86 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms