Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPNS1P04632 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CAPNS1P04632 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CAPNS1P04632 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.24□□□□□ -0.13
CAPNS1P04632 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CAPNS1P04632 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.23□□□□□ -0.13
CAPNS1P04632 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.23□□□□□ -0.13
CAPNS1P04632 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CAPNS1P04632 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 ST20-AS1-201ENST00000560255 4223 ntBASIC14.23□□□□□ -0.13
CAPNS1P04632 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CAPNS1P04632 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CAPNS1P04632 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.23□□□□□ -0.13
CAPNS1P04632 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.23□□□□□ -0.13
CAPNS1P04632 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.23□□□□□ -0.13
CAPNS1P04632 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.23□□□□□ -0.13
CAPNS1P04632 RPL18AP3-201ENST00000462885 528 ntBASIC14.23□□□□□ -0.13
CAPNS1P04632 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.23□□□□□ -0.13
CAPNS1P04632 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 AC100827.2-201ENST00000563214 1194 ntBASIC14.23□□□□□ -0.13
CAPNS1P04632 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 MIR4683-201ENST00000579659 81 ntBASIC14.23□□□□□ -0.13
CAPNS1P04632 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.23□□□□□ -0.13
CAPNS1P04632 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.23□□□□□ -0.13
CAPNS1P04632 AC018695.6-201ENST00000614011 534 ntBASIC14.23□□□□□ -0.13
CAPNS1P04632 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CAPNS1P04632 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.23□□□□□ -0.13
CAPNS1P04632 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.23□□□□□ -0.13
CAPNS1P04632 AC097376.2-205ENST00000610159 5334 ntBASIC14.23□□□□□ -0.13
CAPNS1P04632 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.23□□□□□ -0.13
CAPNS1P04632 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.23□□□□□ -0.13
CAPNS1P04632 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CAPNS1P04632 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CAPNS1P04632 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CAPNS1P04632 AL158070.2-201ENST00000623713 1621 ntBASIC14.23□□□□□ -0.13
CAPNS1P04632 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.22□□□□□ -0.13
CAPNS1P04632 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.22□□□□□ -0.13
CAPNS1P04632 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPNS1P04632 CAP2P1-201ENST00000557743 1390 ntBASIC14.22□□□□□ -0.13
CAPNS1P04632 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CAPNS1P04632 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.22□□□□□ -0.13
CAPNS1P04632 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.22□□□□□ -0.13
CAPNS1P04632 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.22□□□□□ -0.13
CAPNS1P04632 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPNS1P04632 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPNS1P04632 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPNS1P04632 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CAPNS1P04632 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CAPNS1P04632 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPNS1P04632 CICP16-201ENST00000502609 2813 ntBASIC14.22□□□□□ -0.13
CAPNS1P04632 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CAPNS1P04632 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CAPNS1P04632 CES1P1-201ENST00000421606 1704 ntBASIC14.22□□□□□ -0.13
CAPNS1P04632 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPNS1P04632 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPNS1P04632 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CAPNS1P04632 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CAPNS1P04632 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.22□□□□□ -0.13
CAPNS1P04632 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.22□□□□□ -0.13
CAPNS1P04632 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.22□□□□□ -0.13
CAPNS1P04632 NDUFS6P1-201ENST00000485187 316 ntBASIC14.22□□□□□ -0.13
CAPNS1P04632 AC026410.1-201ENST00000507366 1101 ntBASIC14.22□□□□□ -0.13
CAPNS1P04632 TMCO5B-205ENST00000530020 894 ntBASIC14.22□□□□□ -0.13
CAPNS1P04632 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.22□□□□□ -0.13
CAPNS1P04632 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CAPNS1P04632 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms