Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CNOT4O95628 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.78□□□□□ -0.36
CNOT4O95628 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 STRCP1-201ENST00000509801 5328 ntBASIC12.78□□□□□ -0.36
CNOT4O95628 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 AL731571.1-201ENST00000617058 5428 ntBASIC12.78□□□□□ -0.36
CNOT4O95628 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.78□□□□□ -0.36
CNOT4O95628 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CNOT4O95628 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CNOT4O95628 MIR33B-201ENST00000385104 96 ntBASIC12.78□□□□□ -0.36
CNOT4O95628 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.78□□□□□ -0.36
CNOT4O95628 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.78□□□□□ -0.36
CNOT4O95628 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.78□□□□□ -0.36
CNOT4O95628 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
CNOT4O95628 AC134698.3-201ENST00000523880 214 ntBASIC12.78□□□□□ -0.36
CNOT4O95628 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.78□□□□□ -0.36
CNOT4O95628 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 MIR5572-201ENST00000583188 137 ntBASIC12.78□□□□□ -0.36
CNOT4O95628 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.78□□□□□ -0.36
CNOT4O95628 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CNOT4O95628 AC104506.1-201ENST00000609247 429 ntBASIC12.78□□□□□ -0.36
CNOT4O95628 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 AC090386.2-201ENST00000623010 1039 ntBASIC12.78□□□□□ -0.36
CNOT4O95628 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CNOT4O95628 AC018629.1-201ENST00000623381 1736 ntBASIC12.78□□□□□ -0.36
CNOT4O95628 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 KRT8P21-201ENST00000430398 1491 ntBASIC12.78□□□□□ -0.36
CNOT4O95628 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CNOT4O95628 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.77□□□□□ -0.36
CNOT4O95628 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CNOT4O95628 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CNOT4O95628 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CNOT4O95628 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CNOT4O95628 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CNOT4O95628 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.77□□□□□ -0.36
CNOT4O95628 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CNOT4O95628 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CNOT4O95628 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CNOT4O95628 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CNOT4O95628 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.77□□□□□ -0.37
CNOT4O95628 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.77□□□□□ -0.37
CNOT4O95628 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.77□□□□□ -0.37
CNOT4O95628 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 AC239868.1-201ENST00000369385 493 ntBASIC12.77□□□□□ -0.37
CNOT4O95628 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CNOT4O95628 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CNOT4O95628 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.77□□□□□ -0.37
CNOT4O95628 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.77□□□□□ -0.37
CNOT4O95628 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.77□□□□□ -0.37
CNOT4O95628 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 AL353637.1-201ENST00000451571 732 ntBASIC12.77□□□□□ -0.37
CNOT4O95628 POU5F1P2-201ENST00000521750 823 ntBASIC12.77□□□□□ -0.37
CNOT4O95628 AC090857.1-201ENST00000527400 390 ntBASIC12.77□□□□□ -0.37
CNOT4O95628 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CNOT4O95628 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.77□□□□□ -0.37
CNOT4O95628 MIR3907-201ENST00000579424 151 ntBASIC12.77□□□□□ -0.37
CNOT4O95628 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms