Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 MEX3B-202ENST00000558133 4333 ntBASIC14.38□□□□□ -0.11
PFDN6O15212 TCAF1P1-201ENST00000414990 2232 ntBASIC14.38□□□□□ -0.11
PFDN6O15212 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PFDN6O15212 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
PFDN6O15212 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN6O15212 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN6O15212 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN6O15212 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN6O15212 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN6O15212 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.38□□□□□ -0.11
PFDN6O15212 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PFDN6O15212 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 RNA5SP412-201ENST00000516234 123 ntBASIC14.38□□□□□ -0.11
PFDN6O15212 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN6O15212 AL162426.1-201ENST00000624141 743 ntBASIC14.38□□□□□ -0.11
PFDN6O15212 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN6O15212 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN6O15212 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN6O15212 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
PFDN6O15212 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN6O15212 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN6O15212 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN6O15212 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PFDN6O15212 AC099336.1-201ENST00000417053 1171 ntBASIC14.37□□□□□ -0.11
PFDN6O15212 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN6O15212 MTX1P1-201ENST00000440904 838 ntBASIC14.37□□□□□ -0.11
PFDN6O15212 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 AC022210.1-201ENST00000449856 793 ntBASIC14.37□□□□□ -0.11
PFDN6O15212 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.37□□□□□ -0.11
PFDN6O15212 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.37□□□□□ -0.11
PFDN6O15212 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 TMEM198B-204ENST00000484016 896 ntBASIC14.37□□□□□ -0.11
PFDN6O15212 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN6O15212 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.37□□□□□ -0.11
PFDN6O15212 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 AC090386.2-201ENST00000623010 1039 ntBASIC14.37□□□□□ -0.11
PFDN6O15212 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PFDN6O15212 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
PFDN6O15212 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
PFDN6O15212 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN6O15212 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PFDN6O15212 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.36□□□□□ -0.11
PFDN6O15212 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PFDN6O15212 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms