Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GABARAPL3Q9BY60 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GABARAPL3Q9BY60 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
GABARAPL3Q9BY60 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GABARAPL3Q9BY60 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GABARAPL3Q9BY60 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
GABARAPL3Q9BY60 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GABARAPL3Q9BY60 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GABARAPL3Q9BY60 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.99□□□□□ -0.33
GABARAPL3Q9BY60 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GABARAPL3Q9BY60 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GABARAPL3Q9BY60 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 AL391825.1-201ENST00000457671 1364 ntBASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 AL590824.1-201ENST00000403828 1349 ntBASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 TPM3P8-201ENST00000330554 643 ntBASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 CD8B2-202ENST00000417670 633 ntBASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 AC003958.1-201ENST00000435883 421 ntBASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 AC012441.1-201ENST00000446669 685 ntBASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 AC079781.4-201ENST00000641908 219 ntBASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 ZNF493-208ENST00000599461 1769 ntBASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 MARK2P16-201ENST00000605714 1723 ntBASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GABARAPL3Q9BY60 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 AC010141.1-201ENST00000411585 623 ntBASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.97□□□□□ -0.33
GABARAPL3Q9BY60 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms