Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 AC018463.1-201ENST00000456674 917 ntBASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 KRT18P15-201ENST00000458108 1291 ntBASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 ALG1L13P-202ENST00000519320 584 ntBASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 MIR3180-2-201ENST00000581748 88 ntBASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 AC005618.3-201ENST00000624928 458 ntBASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
ATP6V0A1Q93050 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 HLA-DMA-203ENST00000395305 777 ntBASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 HIST2H2BA-201ENST00000412169 381 ntBASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 AP003398.1-201ENST00000531124 318 ntBASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 NUDT4P2-201ENST00000578341 546 ntBASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 MIR6858-201ENST00000620733 67 ntBASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 AC009084.3-201ENST00000623356 437 ntBASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 AC073911.3-201ENST00000624401 631 ntBASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 AL161773.1-201ENST00000624845 863 ntBASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 HLA-C-210ENST00000640219 976 ntBASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
ATP6V0A1Q93050 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms