Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLDND2Q8NHS1 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AC091046.1-201ENST00000331871 207 ntBASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 HINT2P1-201ENST00000419438 481 ntBASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 PDIA3P2-201ENST00000428073 158 ntBASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AC103988.2-201ENST00000561804 725 ntBASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AL133499.1-201ENST00000596207 608 ntBASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AC133540.1-201ENST00000620845 1019 ntBASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.22□□□□□ -0.45
CLDND2Q8NHS1 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 NUTM2HP-201ENST00000442076 2498 ntBASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 KRT8P21-201ENST00000430398 1491 ntBASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 AL591122.2-201ENST00000624125 1853 ntBASIC12.21□□□□□ -0.45
CLDND2Q8NHS1 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms