Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.05■□□□□ 0
SCUBE3Q8IX30 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SCUBE3Q8IX30 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SCUBE3Q8IX30 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.05■□□□□ 0
SCUBE3Q8IX30 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.05■□□□□ 0
SCUBE3Q8IX30 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SCUBE3Q8IX30 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.05■□□□□ -0
SCUBE3Q8IX30 AL662890.1-201ENST00000396818 632 ntBASIC15.05■□□□□ -0
SCUBE3Q8IX30 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
SCUBE3Q8IX30 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.05■□□□□ -0
SCUBE3Q8IX30 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.05■□□□□ -0
SCUBE3Q8IX30 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.05■□□□□ -0
SCUBE3Q8IX30 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.05■□□□□ -0
SCUBE3Q8IX30 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.05■□□□□ -0
SCUBE3Q8IX30 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.05■□□□□ -0
SCUBE3Q8IX30 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.05■□□□□ -0
SCUBE3Q8IX30 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
SCUBE3Q8IX30 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SCUBE3Q8IX30 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.05■□□□□ -0
SCUBE3Q8IX30 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SCUBE3Q8IX30 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.05■□□□□ -0
SCUBE3Q8IX30 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SCUBE3Q8IX30 AC015909.3-201ENST00000572855 1794 ntBASIC15.05■□□□□ -0
SCUBE3Q8IX30 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SCUBE3Q8IX30 AC011474.4-201ENST00000623523 2076 ntBASIC15.05■□□□□ -0
SCUBE3Q8IX30 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.05■□□□□ -0
SCUBE3Q8IX30 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.05■□□□□ -0
SCUBE3Q8IX30 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.05■□□□□ -0
SCUBE3Q8IX30 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.05■□□□□ -0
SCUBE3Q8IX30 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SCUBE3Q8IX30 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 SBF1P1-201ENST00000444527 5631 ntBASIC15.04■□□□□ -0
SCUBE3Q8IX30 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 LINC01815-202ENST00000641468 1409 ntBASIC15.04■□□□□ -0
SCUBE3Q8IX30 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 RNA5SP359-201ENST00000364838 113 ntBASIC15.04■□□□□ -0
SCUBE3Q8IX30 AC239868.1-201ENST00000369385 493 ntBASIC15.04■□□□□ -0
SCUBE3Q8IX30 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.04■□□□□ -0
SCUBE3Q8IX30 AC253536.4-201ENST00000440539 267 ntBASIC15.04■□□□□ -0
SCUBE3Q8IX30 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 RN7SL277P-201ENST00000481521 288 ntBASIC15.04■□□□□ -0
SCUBE3Q8IX30 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 AL022334.2-201ENST00000610000 484 ntBASIC15.04■□□□□ -0
SCUBE3Q8IX30 AC108359.1-201ENST00000616451 1211 ntBASIC15.04■□□□□ -0
SCUBE3Q8IX30 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SCUBE3Q8IX30 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.04■□□□□ -0
SCUBE3Q8IX30 BRD7P5-201ENST00000299197 1822 ntBASIC15.03■□□□□ -0
SCUBE3Q8IX30 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 GRK6P1-201ENST00000400595 1711 ntBASIC15.03■□□□□ -0
SCUBE3Q8IX30 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 AC005840.4-201ENST00000541242 2494 ntBASIC15.03■□□□□ -0
SCUBE3Q8IX30 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms