Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 AC009779.1-201ENST00000551138 283 ntBASIC12.95□□□□□ -0.34
ATG4DQ86TL0 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 AL136295.7-201ENST00000619226 1200 ntBASIC12.95□□□□□ -0.34
ATG4DQ86TL0 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 AC073548.1-201ENST00000624088 1882 ntBASIC12.95□□□□□ -0.34
ATG4DQ86TL0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.95□□□□□ -0.34
ATG4DQ86TL0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.94□□□□□ -0.34
ATG4DQ86TL0 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 RCC2P1-201ENST00000452257 1476 ntBASIC12.94□□□□□ -0.34
ATG4DQ86TL0 AC061965.1-201ENST00000560524 1465 ntBASIC12.94□□□□□ -0.34
ATG4DQ86TL0 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 SERPINA13P-202ENST00000478994 924 ntBASIC12.94□□□□□ -0.34
ATG4DQ86TL0 AC106794.1-201ENST00000506935 792 ntBASIC12.94□□□□□ -0.34
ATG4DQ86TL0 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 AL132994.2-201ENST00000603120 687 ntBASIC12.94□□□□□ -0.34
ATG4DQ86TL0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 AC105206.1-202ENST00000314927 2368 ntBASIC12.94□□□□□ -0.34
ATG4DQ86TL0 LINC01815-202ENST00000641468 1409 ntBASIC12.94□□□□□ -0.34
ATG4DQ86TL0 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 NCLP1-201ENST00000445357 1963 ntBASIC12.94□□□□□ -0.34
ATG4DQ86TL0 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.94□□□□□ -0.34
ATG4DQ86TL0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATG4DQ86TL0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 204 ms