Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 AL161932.2-201ENST00000435436 679 ntBASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 AL161670.2-201ENST00000557650 1227 ntBASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 AC091812.3-201ENST00000621362 345 ntBASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.93□□□□□ -0.02
RFWD3Q6PCD5 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 AC239868.1-201ENST00000369385 493 ntBASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 PDIA3P2-201ENST00000428073 158 ntBASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 IMP3P2-201ENST00000489760 475 ntBASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 FGFR3P5-201ENST00000564496 886 ntBASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 AC068587.10-201ENST00000641210 219 ntBASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 AC015909.3-201ENST00000572855 1794 ntBASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms