Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 KRT18P15-201ENST00000458108 1291 ntBASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 AC013553.1-201ENST00000560906 267 ntBASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 MIR4472-1-201ENST00000584349 80 ntBASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 AC010976.2-201ENST00000609697 852 ntBASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 AC073592.2-201ENST00000623062 780 ntBASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.46■□□□□ 0.22
SHROOM1Q2M3G4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
SHROOM1Q2M3G4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
SHROOM1Q2M3G4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.46■□□□□ 0.22
SHROOM1Q2M3G4 TUBB8P4-201ENST00000511806 1324 ntBASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 AL365181.1-201ENST00000564032 1828 ntBASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 EEF1DP2-201ENST00000433698 843 ntBASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 AC006529.1-201ENST00000459978 637 ntBASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 RN7SL23P-201ENST00000484055 275 ntBASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 RN7SL767P-201ENST00000493013 295 ntBASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 GOLGA2P8-201ENST00000505201 779 ntBASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 KRT18P37-201ENST00000520711 1282 ntBASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 RN7SL556P-201ENST00000582856 298 ntBASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 AC011247.3-201ENST00000603297 438 ntBASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 AL672207.1-201ENST00000328462 1570 ntBASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SHROOM1Q2M3G4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 FUCA1P1-201ENST00000374476 1351 ntBASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 USP17L6P-201ENST00000382470 1197 ntBASIC16.44■□□□□ 0.22
SHROOM1Q2M3G4 MIR1227-201ENST00000408484 88 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms