Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP7AQ04656 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ATP7AQ04656 FTH1P18-201ENST00000412071 549 ntBASIC20.4■□□□□ 0.86
ATP7AQ04656 TPT1P9-201ENST00000413759 514 ntBASIC20.4■□□□□ 0.86
ATP7AQ04656 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP7AQ04656 AL356000.1-201ENST00000441073 1238 ntBASIC20.4■□□□□ 0.86
ATP7AQ04656 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC20.4■□□□□ 0.86
ATP7AQ04656 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP7AQ04656 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC20.4■□□□□ 0.86
ATP7AQ04656 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP7AQ04656 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP7AQ04656 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP7AQ04656 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATP7AQ04656 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP7AQ04656 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ATP7AQ04656 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP7AQ04656 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP7AQ04656 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
ATP7AQ04656 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP7AQ04656 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP7AQ04656 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP7AQ04656 AC245140.2-201ENST00000624054 1939 ntBASIC20.39■□□□□ 0.86
ATP7AQ04656 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC20.39■□□□□ 0.86
ATP7AQ04656 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP7AQ04656 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP7AQ04656 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
ATP7AQ04656 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
ATP7AQ04656 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP7AQ04656 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC20.39■□□□□ 0.85
ATP7AQ04656 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
ATP7AQ04656 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP7AQ04656 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC20.39■□□□□ 0.85
ATP7AQ04656 CDKN2A-AS1-201ENST00000441769 823 ntBASIC20.39■□□□□ 0.85
ATP7AQ04656 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP7AQ04656 PEBP1P3-201ENST00000455475 548 ntBASIC20.39■□□□□ 0.85
ATP7AQ04656 SNORA47-201ENST00000458862 138 ntBASIC20.39■□□□□ 0.85
ATP7AQ04656 RN7SL173P-201ENST00000461853 292 ntBASIC20.39■□□□□ 0.85
ATP7AQ04656 RN7SL846P-201ENST00000467429 292 ntBASIC20.39■□□□□ 0.85
ATP7AQ04656 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP7AQ04656 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP7AQ04656 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC20.39■□□□□ 0.85
ATP7AQ04656 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP7AQ04656 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP7AQ04656 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
ATP7AQ04656 IFNL3P1-201ENST00000595082 501 ntBASIC20.39■□□□□ 0.85
ATP7AQ04656 EMP3-204ENST00000596315 761 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP7AQ04656 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP7AQ04656 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP7AQ04656 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP7AQ04656 AC034205.3-201ENST00000603595 1376 ntBASIC20.39■□□□□ 0.85
ATP7AQ04656 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP7AQ04656 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP7AQ04656 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP7AQ04656 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP7AQ04656 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP7AQ04656 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ATP7AQ04656 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 RBM14-205ENST00000443702 732 ntTSL 3 BASIC20.38■□□□□ 0.85
ATP7AQ04656 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC20.38■□□□□ 0.85
ATP7AQ04656 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP7AQ04656 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
ATP7AQ04656 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP7AQ04656 NAA38-204ENST00000575208 529 ntTSL 3 BASIC20.38■□□□□ 0.85
ATP7AQ04656 CLPP-205ENST00000596605 646 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP7AQ04656 AC087072.1-201ENST00000603727 421 ntBASIC20.38■□□□□ 0.85
ATP7AQ04656 AC138627.1-201ENST00000641127 1257 ntBASIC20.38■□□□□ 0.85
ATP7AQ04656 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
ATP7AQ04656 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP7AQ04656 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ATP7AQ04656 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
ATP7AQ04656 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
ATP7AQ04656 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP7AQ04656 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ATP7AQ04656 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 AL513497.1-201ENST00000624273 2083 ntBASIC20.38■□□□□ 0.85
ATP7AQ04656 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP7AQ04656 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP7AQ04656 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP7AQ04656 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATP7AQ04656 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP7AQ04656 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ATP7AQ04656 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP7AQ04656 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP7AQ04656 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC20.37■□□□□ 0.85
ATP7AQ04656 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC20.37■□□□□ 0.85
ATP7AQ04656 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC20.37■□□□□ 0.85
ATP7AQ04656 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC20.37■□□□□ 0.85
ATP7AQ04656 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms