Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CASP9P55211 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP9P55211 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.59□□□□□ -0.23
CASP9P55211 AL136309.1-201ENST00000403917 691 ntBASIC13.59□□□□□ -0.23
CASP9P55211 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP9P55211 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CASP9P55211 U91328.1-201ENST00000437528 223 ntBASIC13.59□□□□□ -0.23
CASP9P55211 HIST2H2BB-201ENST00000449108 381 ntBASIC13.59□□□□□ -0.23
CASP9P55211 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CASP9P55211 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.59□□□□□ -0.23
CASP9P55211 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.59□□□□□ -0.23
CASP9P55211 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.59□□□□□ -0.23
CASP9P55211 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.59□□□□□ -0.23
CASP9P55211 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.59□□□□□ -0.23
CASP9P55211 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CASP9P55211 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.59□□□□□ -0.23
CASP9P55211 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.59□□□□□ -0.23
CASP9P55211 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 AHCYP2-201ENST00000430630 1300 ntBASIC13.59□□□□□ -0.23
CASP9P55211 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.59□□□□□ -0.23
CASP9P55211 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CASP9P55211 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.59□□□□□ -0.23
CASP9P55211 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 PDIA3P1-201ENST00000471856 1510 ntBASIC13.59□□□□□ -0.23
CASP9P55211 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.59□□□□□ -0.23
CASP9P55211 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CASP9P55211 MIR193BHG-211ENST00000641433 5365 ntBASIC13.59□□□□□ -0.23
CASP9P55211 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CASP9P55211 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.58□□□□□ -0.23
CASP9P55211 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.58□□□□□ -0.23
CASP9P55211 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CASP9P55211 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CASP9P55211 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CASP9P55211 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
CASP9P55211 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.58□□□□□ -0.23
CASP9P55211 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CASP9P55211 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.58□□□□□ -0.23
CASP9P55211 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
CASP9P55211 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CASP9P55211 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CASP9P55211 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.58□□□□□ -0.24
CASP9P55211 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
CASP9P55211 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CASP9P55211 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.58□□□□□ -0.24
CASP9P55211 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.58□□□□□ -0.24
CASP9P55211 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CASP9P55211 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.58□□□□□ -0.24
CASP9P55211 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.58□□□□□ -0.24
CASP9P55211 CHMP1AP1-201ENST00000445563 662 ntBASIC13.58□□□□□ -0.24
CASP9P55211 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.58□□□□□ -0.24
CASP9P55211 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.58□□□□□ -0.24
CASP9P55211 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.58□□□□□ -0.24
CASP9P55211 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.58□□□□□ -0.24
CASP9P55211 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.58□□□□□ -0.24
CASP9P55211 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.58□□□□□ -0.24
CASP9P55211 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.58□□□□□ -0.24
CASP9P55211 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.58□□□□□ -0.24
CASP9P55211 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
CASP9P55211 AC005252.3-201ENST00000623855 2258 ntBASIC13.58□□□□□ -0.24
CASP9P55211 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.58□□□□□ -0.24
CASP9P55211 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 AC092053.3-201ENST00000641308 4975 ntBASIC13.58□□□□□ -0.24
CASP9P55211 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.58□□□□□ -0.24
CASP9P55211 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
CASP9P55211 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.58□□□□□ -0.24
CASP9P55211 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CASP9P55211 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP9P55211 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CASP9P55211 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP9P55211 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms