Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRPF1P55201 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
BRPF1P55201 NOC2LP1-201ENST00000450578 752 ntBASIC18.11■□□□□ 0.49
BRPF1P55201 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.11■□□□□ 0.49
BRPF1P55201 RN7SL181P-201ENST00000462921 277 ntBASIC18.11■□□□□ 0.49
BRPF1P55201 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.11■□□□□ 0.49
BRPF1P55201 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
BRPF1P55201 AC135983.4-201ENST00000564116 1262 ntBASIC18.11■□□□□ 0.49
BRPF1P55201 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.11■□□□□ 0.49
BRPF1P55201 AF254983.2-201ENST00000612331 135 ntBASIC18.11■□□□□ 0.49
BRPF1P55201 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.11■□□□□ 0.49
BRPF1P55201 FRMPD2B-201ENST00000431305 1347 ntBASIC18.11■□□□□ 0.49
BRPF1P55201 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.11■□□□□ 0.49
BRPF1P55201 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.11■□□□□ 0.49
BRPF1P55201 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
BRPF1P55201 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
BRPF1P55201 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRPF1P55201 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
BRPF1P55201 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRPF1P55201 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRPF1P55201 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC18.11■□□□□ 0.49
BRPF1P55201 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRPF1P55201 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRPF1P55201 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRPF1P55201 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRPF1P55201 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRPF1P55201 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC18.1■□□□□ 0.49
BRPF1P55201 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BRPF1P55201 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
BRPF1P55201 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BRPF1P55201 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRPF1P55201 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRPF1P55201 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
BRPF1P55201 KRT8P31-201ENST00000504812 1408 ntBASIC18.1■□□□□ 0.49
BRPF1P55201 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRPF1P55201 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.1■□□□□ 0.49
BRPF1P55201 BANF1P3-201ENST00000412556 261 ntBASIC18.1■□□□□ 0.49
BRPF1P55201 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.1■□□□□ 0.49
BRPF1P55201 PPP1R2P4-201ENST00000424051 595 ntBASIC18.1■□□□□ 0.49
BRPF1P55201 RN7SL8P-201ENST00000461771 266 ntBASIC18.1■□□□□ 0.49
BRPF1P55201 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.1■□□□□ 0.49
BRPF1P55201 AC005740.1-201ENST00000515639 522 ntBASIC18.1■□□□□ 0.49
BRPF1P55201 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.1■□□□□ 0.49
BRPF1P55201 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.1■□□□□ 0.49
BRPF1P55201 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.1■□□□□ 0.49
BRPF1P55201 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRPF1P55201 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRPF1P55201 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRPF1P55201 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BRPF1P55201 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRPF1P55201 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.1■□□□□ 0.49
BRPF1P55201 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRPF1P55201 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
BRPF1P55201 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
BRPF1P55201 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
BRPF1P55201 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRPF1P55201 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
BRPF1P55201 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.1■□□□□ 0.49
BRPF1P55201 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 AC015909.3-201ENST00000572855 1794 ntBASIC18.09■□□□□ 0.49
BRPF1P55201 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC18.09■□□□□ 0.49
BRPF1P55201 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.09■□□□□ 0.49
BRPF1P55201 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
BRPF1P55201 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC18.09■□□□□ 0.49
BRPF1P55201 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
BRPF1P55201 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 AC005840.4-201ENST00000541242 2494 ntBASIC18.09■□□□□ 0.49
BRPF1P55201 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BRPF1P55201 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.09■□□□□ 0.49
BRPF1P55201 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.09■□□□□ 0.49
BRPF1P55201 RN7SL258P-201ENST00000478664 300 ntBASIC18.09■□□□□ 0.49
BRPF1P55201 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.09■□□□□ 0.49
BRPF1P55201 AC019193.1-201ENST00000506678 823 ntBASIC18.09■□□□□ 0.49
BRPF1P55201 NDUFB10P1-201ENST00000567319 521 ntBASIC18.09■□□□□ 0.49
BRPF1P55201 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.09■□□□□ 0.49
BRPF1P55201 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.09■□□□□ 0.49
BRPF1P55201 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.09■□□□□ 0.49
BRPF1P55201 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
BRPF1P55201 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
BRPF1P55201 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRPF1P55201 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRPF1P55201 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRPF1P55201 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRPF1P55201 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms