Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
MRE11P49959 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRE11P49959 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MRE11P49959 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
MRE11P49959 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.78■□□□□ 0.28
MRE11P49959 AL359845.1-201ENST00000458202 1648 ntBASIC16.78■□□□□ 0.28
MRE11P49959 AC115284.2-201ENST00000624646 2054 ntBASIC16.77■□□□□ 0.28
MRE11P49959 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.77■□□□□ 0.28
MRE11P49959 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.77■□□□□ 0.28
MRE11P49959 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC16.77■□□□□ 0.28
MRE11P49959 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
MRE11P49959 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC16.77■□□□□ 0.28
MRE11P49959 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
MRE11P49959 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.77■□□□□ 0.28
MRE11P49959 KRT18P64-201ENST00000434946 1219 ntBASIC16.77■□□□□ 0.28
MRE11P49959 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.77■□□□□ 0.28
MRE11P49959 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.77■□□□□ 0.28
MRE11P49959 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.77■□□□□ 0.28
MRE11P49959 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.77■□□□□ 0.28
MRE11P49959 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRE11P49959 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC16.77■□□□□ 0.28
MRE11P49959 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
MRE11P49959 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC16.77■□□□□ 0.27
MRE11P49959 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MRE11P49959 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MRE11P49959 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MRE11P49959 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MRE11P49959 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MRE11P49959 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MRE11P49959 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MRE11P49959 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MRE11P49959 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
MRE11P49959 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.77■□□□□ 0.27
MRE11P49959 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MRE11P49959 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC16.76■□□□□ 0.27
MRE11P49959 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.76■□□□□ 0.27
MRE11P49959 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 AL445250.1-201ENST00000641671 2259 ntBASIC16.76■□□□□ 0.27
MRE11P49959 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC16.76■□□□□ 0.27
MRE11P49959 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MRE11P49959 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
MRE11P49959 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 AC005229.1-201ENST00000392885 409 ntBASIC16.76■□□□□ 0.27
MRE11P49959 HINT2P1-201ENST00000419438 481 ntBASIC16.76■□□□□ 0.27
MRE11P49959 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.76■□□□□ 0.27
MRE11P49959 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.76■□□□□ 0.27
MRE11P49959 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.76■□□□□ 0.27
MRE11P49959 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MRE11P49959 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.76■□□□□ 0.27
MRE11P49959 KRT18P8-201ENST00000581937 1246 ntBASIC16.76■□□□□ 0.27
MRE11P49959 AC007967.4-201ENST00000614700 386 ntBASIC16.76■□□□□ 0.27
MRE11P49959 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.76■□□□□ 0.27
MRE11P49959 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.76■□□□□ 0.27
MRE11P49959 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MRE11P49959 AGGF1P10-201ENST00000635005 2191 ntBASIC16.76■□□□□ 0.27
MRE11P49959 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC16.76■□□□□ 0.27
MRE11P49959 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MRE11P49959 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.76■□□□□ 0.27
MRE11P49959 AP003969.2-201ENST00000623739 2275 ntBASIC16.76■□□□□ 0.27
MRE11P49959 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MRE11P49959 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.76■□□□□ 0.27
MRE11P49959 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MRE11P49959 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRE11P49959 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
MRE11P49959 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MRE11P49959 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.75■□□□□ 0.27
MRE11P49959 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms