Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC15.37■□□□□ 0.05
HTTP42858 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC15.37■□□□□ 0.05
HTTP42858 MED11-203ENST00000575284 652 ntTSL 3 BASIC15.37■□□□□ 0.05
HTTP42858 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC15.37■□□□□ 0.05
HTTP42858 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC15.37■□□□□ 0.05
HTTP42858 AC009779.7-201ENST00000609031 469 ntBASIC15.37■□□□□ 0.05
HTTP42858 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HTTP42858 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.37■□□□□ 0.05
HTTP42858 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
HTTP42858 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.37■□□□□ 0.05
HTTP42858 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
HTTP42858 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 OR2A1-AS1-203ENST00000468575 568 ntBASIC15.37■□□□□ 0.05
HTTP42858 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HTTP42858 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC15.37■□□□□ 0.05
HTTP42858 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC15.37■□□□□ 0.05
HTTP42858 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HTTP42858 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
HTTP42858 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 IMPDH1P5-201ENST00000439688 1540 ntBASIC15.36■□□□□ 0.05
HTTP42858 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
HTTP42858 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.36■□□□□ 0.05
HTTP42858 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 SERPINB8P1-201ENST00000401898 377 ntBASIC15.36■□□□□ 0.05
HTTP42858 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HTTP42858 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC15.36■□□□□ 0.05
HTTP42858 KRT127P-201ENST00000547183 433 ntBASIC15.36■□□□□ 0.05
HTTP42858 FOS-205ENST00000555242 629 ntTSL 2 BASIC15.36■□□□□ 0.05
HTTP42858 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC15.36■□□□□ 0.05
HTTP42858 HNRNPA1P11-201ENST00000580106 956 ntBASIC15.36■□□□□ 0.05
HTTP42858 AC002511.3-201ENST00000638098 420 ntBASIC15.36■□□□□ 0.05
HTTP42858 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC15.36■□□□□ 0.05
HTTP42858 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
HTTP42858 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.36■□□□□ 0.05
HTTP42858 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.36■□□□□ 0.05
HTTP42858 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 PMF1-201ENST00000368273 884 ntTSL 2 BASIC15.36■□□□□ 0.05
HTTP42858 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC15.36■□□□□ 0.05
HTTP42858 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC15.36■□□□□ 0.05
HTTP42858 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HTTP42858 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC15.36■□□□□ 0.05
HTTP42858 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HTTP42858 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
HTTP42858 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.35■□□□□ 0.05
HTTP42858 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
HTTP42858 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 AL137077.1-201ENST00000442115 528 ntBASIC15.35■□□□□ 0.05
HTTP42858 MIR1587-201ENST00000583319 53 ntBASIC15.35■□□□□ 0.05
HTTP42858 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.35■□□□□ 0.05
HTTP42858 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
HTTP42858 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HTTP42858 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HTTP42858 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC15.35■□□□□ 0.05
HTTP42858 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC15.35■□□□□ 0.05
HTTP42858 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 CD37-203ENST00000426897 1204 ntTSL 2 BASIC15.35■□□□□ 0.05
HTTP42858 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC15.35■□□□□ 0.05
HTTP42858 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HTTP42858 AC136475.7-201ENST00000602949 592 ntBASIC15.35■□□□□ 0.05
HTTP42858 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC15.35■□□□□ 0.05
HTTP42858 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
HTTP42858 LINC00552-201ENST00000625151 2579 ntBASIC15.35■□□□□ 0.05
HTTP42858 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.35■□□□□ 0.05
HTTP42858 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.35■□□□□ 0.05
HTTP42858 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.35■□□□□ 0.05
HTTP42858 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HTTP42858 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HTTP42858 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HTTP42858 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms