Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.69■□□□□ 0.1
USP8P40818 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.69■□□□□ 0.1
USP8P40818 AC009093.10-201ENST00000641956 1442 ntBASIC15.69■□□□□ 0.1
USP8P40818 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.69■□□□□ 0.1
USP8P40818 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
USP8P40818 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC15.69■□□□□ 0.1
USP8P40818 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.69■□□□□ 0.1
USP8P40818 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
USP8P40818 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC15.69■□□□□ 0.1
USP8P40818 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
USP8P40818 MIR326-201ENST00000362220 95 ntBASIC15.69■□□□□ 0.1
USP8P40818 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.69■□□□□ 0.1
USP8P40818 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.69■□□□□ 0.1
USP8P40818 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.69■□□□□ 0.1
USP8P40818 U91328.1-201ENST00000437528 223 ntBASIC15.69■□□□□ 0.1
USP8P40818 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.69■□□□□ 0.1
USP8P40818 CHMP1AP1-201ENST00000445563 662 ntBASIC15.69■□□□□ 0.1
USP8P40818 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.69■□□□□ 0.1
USP8P40818 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.69■□□□□ 0.1
USP8P40818 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.69■□□□□ 0.1
USP8P40818 AC104989.1-201ENST00000519711 778 ntBASIC15.69■□□□□ 0.1
USP8P40818 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
USP8P40818 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.69■□□□□ 0.1
USP8P40818 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 AC079316.1-201ENST00000548397 411 ntBASIC15.69■□□□□ 0.1
USP8P40818 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 AC106886.1-201ENST00000568660 600 ntBASIC15.69■□□□□ 0.1
USP8P40818 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.69■□□□□ 0.1
USP8P40818 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
USP8P40818 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.69■□□□□ 0.1
USP8P40818 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
USP8P40818 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC15.69■□□□□ 0.1
USP8P40818 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.69■□□□□ 0.1
USP8P40818 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
USP8P40818 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP8P40818 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.69■□□□□ 0.1
USP8P40818 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
USP8P40818 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.68■□□□□ 0.1
USP8P40818 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC15.68■□□□□ 0.1
USP8P40818 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
USP8P40818 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
USP8P40818 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC15.68■□□□□ 0.1
USP8P40818 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
USP8P40818 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.68■□□□□ 0.1
USP8P40818 ANKRD19P-201ENST00000338192 862 ntBASIC15.68■□□□□ 0.1
USP8P40818 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.68■□□□□ 0.1
USP8P40818 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.68■□□□□ 0.1
USP8P40818 MIR1909-201ENST00000411312 80 ntBASIC15.68■□□□□ 0.1
USP8P40818 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.68■□□□□ 0.1
USP8P40818 SNX29P1-201ENST00000548357 1007 ntBASIC15.68■□□□□ 0.1
USP8P40818 AC027237.1-201ENST00000560942 655 ntBASIC15.68■□□□□ 0.1
USP8P40818 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.68■□□□□ 0.1
USP8P40818 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
USP8P40818 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.68■□□□□ 0.1
USP8P40818 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.68■□□□□ 0.1
USP8P40818 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.68■□□□□ 0.1
USP8P40818 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
USP8P40818 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.68■□□□□ 0.1
USP8P40818 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.68■□□□□ 0.1
USP8P40818 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP8P40818 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms