Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXA6P31267 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HOXA6P31267 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
HOXA6P31267 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.85□□□□□ -0.19
HOXA6P31267 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXA6P31267 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.85□□□□□ -0.19
HOXA6P31267 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HOXA6P31267 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXA6P31267 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXA6P31267 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXA6P31267 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXA6P31267 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXA6P31267 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXA6P31267 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HOXA6P31267 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXA6P31267 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.85□□□□□ -0.19
HOXA6P31267 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXA6P31267 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 AC022532.1-201ENST00000624563 1728 ntBASIC13.84□□□□□ -0.19
HOXA6P31267 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.84□□□□□ -0.19
HOXA6P31267 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.84□□□□□ -0.19
HOXA6P31267 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXA6P31267 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXA6P31267 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.84□□□□□ -0.19
HOXA6P31267 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 VDAC1P11-201ENST00000458323 852 ntBASIC13.84□□□□□ -0.19
HOXA6P31267 RPL29P2-201ENST00000488409 460 ntBASIC13.84□□□□□ -0.19
HOXA6P31267 RPSAP70-201ENST00000504462 864 ntBASIC13.84□□□□□ -0.19
HOXA6P31267 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXA6P31267 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 DUT-207ENST00000559416 635 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXA6P31267 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC13.84□□□□□ -0.19
HOXA6P31267 ANKRD26P1-203ENST00000569528 966 ntBASIC13.84□□□□□ -0.19
HOXA6P31267 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HOXA6P31267 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC13.84□□□□□ -0.19
HOXA6P31267 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.84□□□□□ -0.19
HOXA6P31267 AL357143.1-203ENST00000639750 881 ntBASIC13.84□□□□□ -0.19
HOXA6P31267 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HOXA6P31267 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
HOXA6P31267 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.84□□□□□ -0.19
HOXA6P31267 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXA6P31267 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HOXA6P31267 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXA6P31267 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HOXA6P31267 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HOXA6P31267 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.83□□□□□ -0.19
HOXA6P31267 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HOXA6P31267 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HOXA6P31267 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
HOXA6P31267 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HOXA6P31267 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
HOXA6P31267 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
HOXA6P31267 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC13.83□□□□□ -0.2
HOXA6P31267 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HOXA6P31267 PHBP10-201ENST00000416467 784 ntBASIC13.83□□□□□ -0.2
HOXA6P31267 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.83□□□□□ -0.2
HOXA6P31267 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.83□□□□□ -0.2
HOXA6P31267 RPL18AP16-201ENST00000424057 531 ntBASIC13.83□□□□□ -0.2
HOXA6P31267 CCND3P1-201ENST00000438347 580 ntBASIC13.83□□□□□ -0.2
HOXA6P31267 AL136084.1-201ENST00000449172 318 ntBASIC13.83□□□□□ -0.2
HOXA6P31267 AC008494.1-201ENST00000497612 796 ntBASIC13.83□□□□□ -0.2
HOXA6P31267 CTBP2P6-201ENST00000526402 1229 ntBASIC13.83□□□□□ -0.2
HOXA6P31267 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC13.83□□□□□ -0.2
HOXA6P31267 RN7SL480P-201ENST00000581481 294 ntBASIC13.83□□□□□ -0.2
HOXA6P31267 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC13.83□□□□□ -0.2
HOXA6P31267 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HOXA6P31267 AC110057.1-201ENST00000636031 898 ntBASIC13.83□□□□□ -0.2
HOXA6P31267 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HOXA6P31267 GUCY2EP-203ENST00000531117 1918 ntBASIC13.83□□□□□ -0.2
HOXA6P31267 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 PPT1-215ENST00000641471 2368 ntBASIC13.83□□□□□ -0.2
HOXA6P31267 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HOXA6P31267 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
HOXA6P31267 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXA6P31267 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms