Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
CCL1P22362 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL1P22362 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CCL1P22362 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CCL1P22362 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
CCL1P22362 AL139158.3-201ENST00000641212 1562 ntBASIC12.26□□□□□ -0.45
CCL1P22362 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
CCL1P22362 FMO6P-201ENST00000236166 1620 ntBASIC12.26□□□□□ -0.45
CCL1P22362 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL1P22362 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CCL1P22362 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CCL1P22362 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CCL1P22362 MSNP1-201ENST00000511640 1732 ntBASIC12.26□□□□□ -0.45
CCL1P22362 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CCL1P22362 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CCL1P22362 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.26□□□□□ -0.45
CCL1P22362 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CCL1P22362 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CCL1P22362 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.26□□□□□ -0.45
CCL1P22362 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CCL1P22362 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.26□□□□□ -0.45
CCL1P22362 AC079776.1-201ENST00000401540 1152 ntBASIC12.26□□□□□ -0.45
CCL1P22362 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL1P22362 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL1P22362 YBX1P6-201ENST00000442962 1002 ntBASIC12.26□□□□□ -0.45
CCL1P22362 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 RPL18P13-201ENST00000478088 569 ntBASIC12.26□□□□□ -0.45
CCL1P22362 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.26□□□□□ -0.45
CCL1P22362 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CCL1P22362 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.26□□□□□ -0.45
CCL1P22362 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.26□□□□□ -0.45
CCL1P22362 AC008805.1-201ENST00000590892 364 ntBASIC12.26□□□□□ -0.45
CCL1P22362 AC012645.4-201ENST00000610691 1061 ntBASIC12.26□□□□□ -0.45
CCL1P22362 AL023803.2-201ENST00000620080 638 ntBASIC12.26□□□□□ -0.45
CCL1P22362 AC092299.1-201ENST00000632679 757 ntBASIC12.26□□□□□ -0.45
CCL1P22362 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CCL1P22362 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
CCL1P22362 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL1P22362 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL1P22362 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 AL358781.1-202ENST00000321081 1360 ntBASIC12.26□□□□□ -0.45
CCL1P22362 KRT8P29-201ENST00000420409 1371 ntBASIC12.26□□□□□ -0.45
CCL1P22362 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL1P22362 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CCL1P22362 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.26□□□□□ -0.45
CCL1P22362 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 NUTM2HP-201ENST00000442076 2498 ntBASIC12.26□□□□□ -0.45
CCL1P22362 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CCL1P22362 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL1P22362 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL1P22362 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms