Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC14.26□□□□□ -0.13
VCANP13611 IFNWP19-201ENST00000438727 566 ntBASIC14.26□□□□□ -0.13
VCANP13611 HLA-DRB9-201ENST00000449413 343 ntBASIC14.26□□□□□ -0.13
VCANP13611 AC096713.1-201ENST00000514650 978 ntBASIC14.26□□□□□ -0.13
VCANP13611 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
VCANP13611 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 AC022382.1-201ENST00000602768 336 ntBASIC14.26□□□□□ -0.13
VCANP13611 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.26□□□□□ -0.13
VCANP13611 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
VCANP13611 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.26□□□□□ -0.13
VCANP13611 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
VCANP13611 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.26□□□□□ -0.13
VCANP13611 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.26□□□□□ -0.13
VCANP13611 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VCANP13611 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.26□□□□□ -0.13
VCANP13611 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.26□□□□□ -0.13
VCANP13611 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.26□□□□□ -0.13
VCANP13611 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VCANP13611 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
VCANP13611 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC14.26□□□□□ -0.13
VCANP13611 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC14.26□□□□□ -0.13
VCANP13611 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC14.26□□□□□ -0.13
VCANP13611 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC14.26□□□□□ -0.13
VCANP13611 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC14.26□□□□□ -0.13
VCANP13611 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.26□□□□□ -0.13
VCANP13611 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCANP13611 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VCANP13611 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VCANP13611 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VCANP13611 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.25□□□□□ -0.13
VCANP13611 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
VCANP13611 AC012100.1-201ENST00000470304 282 ntBASIC14.25□□□□□ -0.13
VCANP13611 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC14.25□□□□□ -0.13
VCANP13611 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VCANP13611 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC14.25□□□□□ -0.13
VCANP13611 RN7SL5P-201ENST00000581458 321 ntBASIC14.25□□□□□ -0.13
VCANP13611 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC14.25□□□□□ -0.13
VCANP13611 MEP1AP1-201ENST00000636082 1097 ntBASIC14.25□□□□□ -0.13
VCANP13611 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCANP13611 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.25□□□□□ -0.13
VCANP13611 AL162727.3-201ENST00000635661 2787 ntBASIC14.25□□□□□ -0.13
VCANP13611 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCANP13611 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCANP13611 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.25□□□□□ -0.13
VCANP13611 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC14.25□□□□□ -0.13
VCANP13611 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.25□□□□□ -0.13
VCANP13611 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCANP13611 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCANP13611 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.25□□□□□ -0.13
VCANP13611 TPM3P7-201ENST00000338274 732 ntBASIC14.25□□□□□ -0.13
VCANP13611 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
VCANP13611 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VCANP13611 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC14.25□□□□□ -0.13
VCANP13611 AC103810.4-201ENST00000578601 257 ntBASIC14.25□□□□□ -0.13
VCANP13611 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCANP13611 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VCANP13611 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.25□□□□□ -0.13
VCANP13611 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VCANP13611 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VCANP13611 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC14.25□□□□□ -0.13
VCANP13611 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC14.25□□□□□ -0.13
VCANP13611 NOS2P2-201ENST00000426269 867 ntBASIC14.25□□□□□ -0.13
VCANP13611 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCANP13611 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC14.25□□□□□ -0.13
VCANP13611 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.25□□□□□ -0.13
VCANP13611 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VCANP13611 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCANP13611 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCANP13611 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCANP13611 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
VCANP13611 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCANP13611 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCANP13611 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VCANP13611 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VCANP13611 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VCANP13611 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC14.24□□□□□ -0.13
VCANP13611 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCANP13611 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VCANP13611 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.24□□□□□ -0.13
VCANP13611 AC116347.1-201ENST00000442824 720 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms