Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
MT-ND1P03886 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.55□□□□□ -0.24
MT-ND1P03886 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 API5-211ENST00000534695 560 ntTSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.55□□□□□ -0.24
MT-ND1P03886 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 CLUHP6-201ENST00000580789 941 ntBASIC13.55□□□□□ -0.24
MT-ND1P03886 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.55□□□□□ -0.24
MT-ND1P03886 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.55□□□□□ -0.24
MT-ND1P03886 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
MT-ND1P03886 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 AC009093.2-202ENST00000620513 2079 ntBASIC13.55□□□□□ -0.24
MT-ND1P03886 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.55□□□□□ -0.24
MT-ND1P03886 CLUHP2-201ENST00000426660 1303 ntBASIC13.55□□□□□ -0.24
MT-ND1P03886 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 MARK2P9-201ENST00000430958 1727 ntBASIC13.55□□□□□ -0.24
MT-ND1P03886 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
MT-ND1P03886 PCDHB19P-202ENST00000625133 2914 ntBASIC13.55□□□□□ -0.24
MT-ND1P03886 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.55□□□□□ -0.24
MT-ND1P03886 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
MT-ND1P03886 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.55□□□□□ -0.24
MT-ND1P03886 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.55□□□□□ -0.24
MT-ND1P03886 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MT-ND1P03886 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
MT-ND1P03886 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
MT-ND1P03886 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.54□□□□□ -0.24
MT-ND1P03886 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
MT-ND1P03886 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.54□□□□□ -0.24
MT-ND1P03886 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 VENTXP1-201ENST00000569334 2716 ntBASIC13.54□□□□□ -0.24
MT-ND1P03886 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.54□□□□□ -0.24
MT-ND1P03886 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 AC022137.2-201ENST00000503482 481 ntBASIC13.54□□□□□ -0.24
MT-ND1P03886 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.54□□□□□ -0.24
MT-ND1P03886 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.54□□□□□ -0.24
MT-ND1P03886 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
MT-ND1P03886 LINC02560-201ENST00000596379 459 ntBASIC13.54□□□□□ -0.24
MT-ND1P03886 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.54□□□□□ -0.24
MT-ND1P03886 CU634019.7-201ENST00000624153 1185 ntBASIC13.54□□□□□ -0.24
MT-ND1P03886 FP236241.2-201ENST00000624906 1185 ntBASIC13.54□□□□□ -0.24
MT-ND1P03886 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.54□□□□□ -0.24
MT-ND1P03886 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.54□□□□□ -0.24
MT-ND1P03886 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
MT-ND1P03886 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
MT-ND1P03886 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.54□□□□□ -0.24
MT-ND1P03886 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.54□□□□□ -0.24
MT-ND1P03886 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.54□□□□□ -0.24
MT-ND1P03886 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
MT-ND1P03886 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
MT-ND1P03886 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
MT-ND1P03886 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
MT-ND1P03886 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.54□□□□□ -0.24
MT-ND1P03886 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.54□□□□□ -0.24
MT-ND1P03886 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.54□□□□□ -0.24
MT-ND1P03886 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC13.53□□□□□ -0.24
MT-ND1P03886 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
MT-ND1P03886 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
MT-ND1P03886 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
MT-ND1P03886 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms