Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-2O95096 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.14□□□□□ -0.31
NKX2-2O95096 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NKX2-2O95096 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NKX2-2O95096 AL365209.1-201ENST00000624418 6473 ntBASIC13.14□□□□□ -0.31
NKX2-2O95096 MARK2P9-201ENST00000430958 1727 ntBASIC13.14□□□□□ -0.31
NKX2-2O95096 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-2O95096 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.14□□□□□ -0.31
NKX2-2O95096 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 AC239868.1-201ENST00000369385 493 ntBASIC13.14□□□□□ -0.31
NKX2-2O95096 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
NKX2-2O95096 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-2O95096 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 AL008707.1-201ENST00000422498 534 ntBASIC13.14□□□□□ -0.31
NKX2-2O95096 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NKX2-2O95096 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-2O95096 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
NKX2-2O95096 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.14□□□□□ -0.31
NKX2-2O95096 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.14□□□□□ -0.31
NKX2-2O95096 AC243960.2-201ENST00000600996 747 ntBASIC13.14□□□□□ -0.31
NKX2-2O95096 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-2O95096 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.14□□□□□ -0.31
NKX2-2O95096 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NKX2-2O95096 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.14□□□□□ -0.31
NKX2-2O95096 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NKX2-2O95096 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NKX2-2O95096 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
NKX2-2O95096 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NKX2-2O95096 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.14□□□□□ -0.31
NKX2-2O95096 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NKX2-2O95096 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-2O95096 NCLP1-201ENST00000445357 1963 ntBASIC13.14□□□□□ -0.31
NKX2-2O95096 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-2O95096 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX2-2O95096 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NKX2-2O95096 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 AL157791.1-201ENST00000553667 1699 ntBASIC13.13□□□□□ -0.31
NKX2-2O95096 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX2-2O95096 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX2-2O95096 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.13□□□□□ -0.31
NKX2-2O95096 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 DUX4L50-201ENST00000455245 715 ntBASIC13.13□□□□□ -0.31
NKX2-2O95096 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.13□□□□□ -0.31
NKX2-2O95096 AC116345.2-201ENST00000512837 523 ntBASIC13.13□□□□□ -0.31
NKX2-2O95096 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 ZNF767P-206ENST00000513792 565 ntBASIC13.13□□□□□ -0.31
NKX2-2O95096 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.13□□□□□ -0.31
NKX2-2O95096 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.13□□□□□ -0.31
NKX2-2O95096 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX2-2O95096 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.13□□□□□ -0.31
NKX2-2O95096 AC020914.3-201ENST00000594712 304 ntBASIC13.13□□□□□ -0.31
NKX2-2O95096 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
NKX2-2O95096 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
NKX2-2O95096 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms