Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.8□□□□□ -0.36
ZIC3O60481 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ZIC3O60481 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.79□□□□□ -0.36
ZIC3O60481 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.79□□□□□ -0.36
ZIC3O60481 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 AL928921.2-201ENST00000641325 2442 ntBASIC12.79□□□□□ -0.36
ZIC3O60481 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.79□□□□□ -0.36
ZIC3O60481 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.79□□□□□ -0.36
ZIC3O60481 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 AC026316.1-201ENST00000398900 414 ntBASIC12.79□□□□□ -0.36
ZIC3O60481 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.79□□□□□ -0.36
ZIC3O60481 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.79□□□□□ -0.36
ZIC3O60481 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.79□□□□□ -0.36
ZIC3O60481 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.79□□□□□ -0.36
ZIC3O60481 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ZIC3O60481 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.79□□□□□ -0.36
ZIC3O60481 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.79□□□□□ -0.36
ZIC3O60481 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.79□□□□□ -0.36
ZIC3O60481 AC084346.2-201ENST00000607097 949 ntBASIC12.79□□□□□ -0.36
ZIC3O60481 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ZIC3O60481 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ZIC3O60481 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.79□□□□□ -0.36
ZIC3O60481 ST20-AS1-201ENST00000560255 4223 ntBASIC12.79□□□□□ -0.36
ZIC3O60481 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.79□□□□□ -0.36
ZIC3O60481 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.79□□□□□ -0.36
ZIC3O60481 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ZIC3O60481 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.79□□□□□ -0.36
ZIC3O60481 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC3O60481 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.79□□□□□ -0.36
ZIC3O60481 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.78□□□□□ -0.36
ZIC3O60481 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ZIC3O60481 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 KRT8P24-201ENST00000560290 1559 ntBASIC12.78□□□□□ -0.36
ZIC3O60481 AC068760.1-201ENST00000493579 1953 ntBASIC12.78□□□□□ -0.36
ZIC3O60481 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
ZIC3O60481 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ZIC3O60481 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC12.78□□□□□ -0.36
ZIC3O60481 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.78□□□□□ -0.36
ZIC3O60481 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.78□□□□□ -0.36
ZIC3O60481 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.78□□□□□ -0.36
ZIC3O60481 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.78□□□□□ -0.36
ZIC3O60481 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.78□□□□□ -0.36
ZIC3O60481 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.78□□□□□ -0.36
ZIC3O60481 RN7SL665P-201ENST00000578793 300 ntBASIC12.78□□□□□ -0.36
ZIC3O60481 MIR4522-201ENST00000584932 87 ntBASIC12.78□□□□□ -0.36
ZIC3O60481 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ZIC3O60481 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.78□□□□□ -0.36
ZIC3O60481 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.78□□□□□ -0.36
ZIC3O60481 AL353726.2-201ENST00000623259 884 ntBASIC12.78□□□□□ -0.36
ZIC3O60481 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.78□□□□□ -0.36
ZIC3O60481 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.78□□□□□ -0.36
ZIC3O60481 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
ZIC3O60481 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
ZIC3O60481 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.78□□□□□ -0.36
ZIC3O60481 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.78□□□□□ -0.36
ZIC3O60481 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.78□□□□□ -0.36
ZIC3O60481 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms