Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLDN5O00501 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDN5O00501 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLDN5O00501 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN5O00501 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN5O00501 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDN5O00501 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDN5O00501 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN5O00501 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN5O00501 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLDN5O00501 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN5O00501 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN5O00501 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CLDN5O00501 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CLDN5O00501 AL928921.2-201ENST00000641325 2442 ntBASIC15.01□□□□□ -0.01
CLDN5O00501 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.01□□□□□ -0.01
CLDN5O00501 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLDN5O00501 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CLDN5O00501 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CLDN5O00501 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CLDN5O00501 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CLDN5O00501 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CLDN5O00501 SHMT1P1-201ENST00000419974 1312 ntBASIC15□□□□□ -0.01
CLDN5O00501 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CLDN5O00501 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CLDN5O00501 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15□□□□□ -0.01
CLDN5O00501 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15□□□□□ -0.01
CLDN5O00501 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15□□□□□ -0.01
CLDN5O00501 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15□□□□□ -0.01
CLDN5O00501 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15□□□□□ -0.01
CLDN5O00501 AC095040.1-201ENST00000513286 675 ntBASIC15□□□□□ -0.01
CLDN5O00501 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15□□□□□ -0.01
CLDN5O00501 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15□□□□□ -0.01
CLDN5O00501 NDUFB10P1-201ENST00000567319 521 ntBASIC15□□□□□ -0.01
CLDN5O00501 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15□□□□□ -0.01
CLDN5O00501 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15□□□□□ -0.01
CLDN5O00501 AL133467.4-201ENST00000602953 725 ntBASIC15□□□□□ -0.01
CLDN5O00501 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15□□□□□ -0.01
CLDN5O00501 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CLDN5O00501 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15□□□□□ -0.01
CLDN5O00501 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15□□□□□ -0.01
CLDN5O00501 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CLDN5O00501 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15□□□□□ -0.01
CLDN5O00501 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15□□□□□ -0.01
CLDN5O00501 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15□□□□□ -0.01
CLDN5O00501 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN5O00501 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CLDN5O00501 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN5O00501 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN5O00501 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN5O00501 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CLDN5O00501 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CLDN5O00501 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN5O00501 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN5O00501 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN5O00501 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN5O00501 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms