Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM5B3KS81 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM5B3KS81 Z97180.1-201ENST00000445173 988 ntBASIC11.98□□□□□ -0.49
SRRM5B3KS81 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC11.98□□□□□ -0.49
SRRM5B3KS81 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
SRRM5B3KS81 AC245884.6-201ENST00000515672 1067 ntBASIC11.98□□□□□ -0.49
SRRM5B3KS81 AC090857.1-201ENST00000527400 390 ntBASIC11.98□□□□□ -0.49
SRRM5B3KS81 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC11.98□□□□□ -0.49
SRRM5B3KS81 KRT18P8-201ENST00000581937 1246 ntBASIC11.98□□□□□ -0.49
SRRM5B3KS81 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC11.98□□□□□ -0.49
SRRM5B3KS81 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SRRM5B3KS81 AC091812.3-201ENST00000621362 345 ntBASIC11.98□□□□□ -0.49
SRRM5B3KS81 AC015967.2-201ENST00000624092 234 ntBASIC11.98□□□□□ -0.49
SRRM5B3KS81 AC006435.4-201ENST00000625037 234 ntBASIC11.98□□□□□ -0.49
SRRM5B3KS81 AL356737.1-201ENST00000634391 234 ntBASIC11.98□□□□□ -0.49
SRRM5B3KS81 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SRRM5B3KS81 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM5B3KS81 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM5B3KS81 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM5B3KS81 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SRRM5B3KS81 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM5B3KS81 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM5B3KS81 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.98□□□□□ -0.49
SRRM5B3KS81 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM5B3KS81 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM5B3KS81 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM5B3KS81 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SRRM5B3KS81 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SRRM5B3KS81 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SRRM5B3KS81 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.97□□□□□ -0.49
SRRM5B3KS81 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 RPS9P1-201ENST00000419943 583 ntBASIC11.97□□□□□ -0.49
SRRM5B3KS81 AL596276.2-201ENST00000447525 331 ntBASIC11.97□□□□□ -0.49
SRRM5B3KS81 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 SPTLC1P5-201ENST00000450718 252 ntBASIC11.97□□□□□ -0.49
SRRM5B3KS81 RN7SL769P-201ENST00000469386 295 ntBASIC11.97□□□□□ -0.49
SRRM5B3KS81 RN7SL11P-201ENST00000471305 293 ntBASIC11.97□□□□□ -0.49
SRRM5B3KS81 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 PARP8-218ENST00000513738 596 ntTSL 4 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 FOS-206ENST00000555347 1280 ntTSL 2 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 AGAP10P-201ENST00000454844 2418 ntBASIC11.97□□□□□ -0.49
SRRM5B3KS81 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.97□□□□□ -0.49
SRRM5B3KS81 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM5B3KS81 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SRRM5B3KS81 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC11.96□□□□□ -0.49
SRRM5B3KS81 AC023794.5-201ENST00000564380 2157 ntBASIC11.96□□□□□ -0.49
SRRM5B3KS81 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
SRRM5B3KS81 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.96□□□□□ -0.49
SRRM5B3KS81 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SRRM5B3KS81 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
SRRM5B3KS81 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SRRM5B3KS81 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
SRRM5B3KS81 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms