Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
SRRM4A7MD48 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
SRRM4A7MD48 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
SRRM4A7MD48 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SRRM4A7MD48 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SRRM4A7MD48 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SRRM4A7MD48 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SRRM4A7MD48 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.52□□□□□ -0.56
SRRM4A7MD48 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SRRM4A7MD48 AC073869.1-201ENST00000415574 2762 ntBASIC11.52□□□□□ -0.56
SRRM4A7MD48 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SRRM4A7MD48 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SRRM4A7MD48 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SRRM4A7MD48 AC007952.5-201ENST00000572818 1486 ntBASIC11.52□□□□□ -0.56
SRRM4A7MD48 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SRRM4A7MD48 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SRRM4A7MD48 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SRRM4A7MD48 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 PGAM1P5-201ENST00000548011 764 ntBASIC11.52□□□□□ -0.57
SRRM4A7MD48 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 AL591471.1-201ENST00000621855 229 ntBASIC11.52□□□□□ -0.57
SRRM4A7MD48 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 AC107918.4-201ENST00000641966 3141 ntBASIC11.52□□□□□ -0.57
SRRM4A7MD48 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 AGAP12P-201ENST00000585227 2359 ntBASIC11.52□□□□□ -0.57
SRRM4A7MD48 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
SRRM4A7MD48 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SRRM4A7MD48 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SRRM4A7MD48 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SRRM4A7MD48 KRT18P36-201ENST00000411618 1276 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms