Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM3Q9BZL3 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 TUBB3P1-201ENST00000405796 1332 ntBASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 KRT18P3-201ENST00000451602 1288 ntBASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 AL512361.1-201ENST00000554200 418 ntBASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 AC040169.1-201ENST00000565382 521 ntBASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 DUX4L47-201ENST00000566374 394 ntBASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 AC107373.2-201ENST00000607735 490 ntBASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 GHET1-201ENST00000627071 1906 ntBASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 Z98257.2-202ENST00000641138 1548 ntBASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM3Q9BZL3 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SMIM3Q9BZL3 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM3Q9BZL3 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SMIM3Q9BZL3 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM3Q9BZL3 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SMIM3Q9BZL3 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM3Q9BZL3 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM3Q9BZL3 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM3Q9BZL3 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM3Q9BZL3 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM3Q9BZL3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM3Q9BZL3 AC010970.1-201ENST00000445125 1848 ntBASIC11.72□□□□□ -0.53
SMIM3Q9BZL3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms