Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
HDAC8Q9BY41 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 MIR6727-201ENST00000620702 65 ntBASIC14.07□□□□□ -0.16
HDAC8Q9BY41 AL161773.1-201ENST00000624845 863 ntBASIC14.07□□□□□ -0.16
HDAC8Q9BY41 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HDAC8Q9BY41 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 RCC2P1-201ENST00000452257 1476 ntBASIC14.06□□□□□ -0.16
HDAC8Q9BY41 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 COQ10BP2-201ENST00000513804 724 ntBASIC14.06□□□□□ -0.16
HDAC8Q9BY41 IGHV3-37-201ENST00000518544 340 ntBASIC14.06□□□□□ -0.16
HDAC8Q9BY41 MIR4750-201ENST00000584564 56 ntBASIC14.06□□□□□ -0.16
HDAC8Q9BY41 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.06□□□□□ -0.16
HDAC8Q9BY41 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 MIR600HG-201ENST00000449175 5984 ntBASIC14.06□□□□□ -0.16
HDAC8Q9BY41 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDAC8Q9BY41 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 AL513477.1-201ENST00000602865 2407 ntBASIC14.05□□□□□ -0.16
HDAC8Q9BY41 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 AC090643.2-201ENST00000623442 2029 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms