Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 AC099063.4-201ENST00000641099 1602 ntBASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 AC097359.2-201ENST00000604992 2389 ntBASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 TUBB8P4-201ENST00000511806 1324 ntBASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2E2Q96LR5 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
UBE2E2Q96LR5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.08□□□□□ -0.63
UBE2E2Q96LR5 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 BX640514.1-201ENST00000583223 1918 ntBASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AC103592.1-201ENST00000394513 664 ntBASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 RPS9P1-201ENST00000419943 583 ntBASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 DUTP3-201ENST00000450025 415 ntBASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 KRT18P15-201ENST00000458108 1291 ntBASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 RN7SL67P-201ENST00000492147 296 ntBASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AC105129.2-201ENST00000559536 390 ntBASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AF254983.2-201ENST00000612331 135 ntBASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AL353726.2-201ENST00000623259 884 ntBASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 FP325330.2-201ENST00000624219 5630 ntBASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 KRT8P31-201ENST00000504812 1408 ntBASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 AL590824.1-201ENST00000403828 1349 ntBASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2E2Q96LR5 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 RPL13AP3-202ENST00000494676 1473 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 AC020910.6-201ENST00000623084 1459 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms