Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.55□□□□□ -0.4
TMEM54Q969K7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 MIR1247-201ENST00000408206 136 ntBASIC12.55□□□□□ -0.4
TMEM54Q969K7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 AC007274.1-201ENST00000439805 662 ntBASIC12.55□□□□□ -0.4
TMEM54Q969K7 BX284668.4-201ENST00000453917 508 ntBASIC12.55□□□□□ -0.4
TMEM54Q969K7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 AC244452.3-201ENST00000636814 210 ntBASIC12.55□□□□□ -0.4
TMEM54Q969K7 AC068760.1-201ENST00000493579 1953 ntBASIC12.55□□□□□ -0.4
TMEM54Q969K7 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 OR8T1P-201ENST00000421347 918 ntBASIC12.54□□□□□ -0.4
TMEM54Q969K7 AC244107.1-201ENST00000442033 332 ntBASIC12.54□□□□□ -0.4
TMEM54Q969K7 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 AC116345.2-201ENST00000512837 523 ntBASIC12.54□□□□□ -0.4
TMEM54Q969K7 SCARNA20.5-201ENST00000516991 142 ntBASIC12.54□□□□□ -0.4
TMEM54Q969K7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 KRT8P1-201ENST00000557533 1207 ntBASIC12.54□□□□□ -0.4
TMEM54Q969K7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 FRMPD2B-201ENST00000431305 1347 ntBASIC12.54□□□□□ -0.4
TMEM54Q969K7 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 AC015909.5-201ENST00000624336 2266 ntBASIC12.54□□□□□ -0.4
TMEM54Q969K7 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.54□□□□□ -0.4
TMEM54Q969K7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TMEM54Q969K7 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 AC089987.1-201ENST00000551654 2209 ntBASIC12.53□□□□□ -0.4
TMEM54Q969K7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms