Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A1Q93050 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.97■□□□□ 0.15
ATP6V0A1Q93050 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A1Q93050 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A1Q93050 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A1Q93050 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A1Q93050 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A1Q93050 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A1Q93050 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ATP6V0A1Q93050 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
ATP6V0A1Q93050 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A1Q93050 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 AC073869.2-201ENST00000417338 1026 ntBASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 OR8T1P-201ENST00000421347 918 ntBASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 AC025262.2-201ENST00000623975 1056 ntBASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 AP001184.1-201ENST00000637936 376 ntBASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A1Q93050 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
ATP6V0A1Q93050 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ATP6V0A1Q93050 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ATP6V0A1Q93050 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.96■□□□□ 0.14
ATP6V0A1Q93050 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.14
ATP6V0A1Q93050 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 LINC00115-201ENST00000473798 1317 ntBASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 AC099063.4-201ENST00000641099 1602 ntBASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 AC103592.1-201ENST00000394513 664 ntBASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 AC107464.3-201ENST00000609172 737 ntBASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ATP6V0A1Q93050 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms