Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.3□□□□□ -0.28
HPS1Q92902 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HPS1Q92902 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 AC018892.3-201ENST00000623986 2499 ntBASIC13.3□□□□□ -0.28
HPS1Q92902 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.29□□□□□ -0.28
HPS1Q92902 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
HPS1Q92902 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.29□□□□□ -0.28
HPS1Q92902 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HPS1Q92902 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.29□□□□□ -0.28
HPS1Q92902 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 TTTY23B-201ENST00000442790 549 ntBASIC13.29□□□□□ -0.28
HPS1Q92902 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.29□□□□□ -0.28
HPS1Q92902 AC007389.4-201ENST00000454674 793 ntBASIC13.29□□□□□ -0.28
HPS1Q92902 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.29□□□□□ -0.28
HPS1Q92902 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.29□□□□□ -0.28
HPS1Q92902 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.29□□□□□ -0.28
HPS1Q92902 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.29□□□□□ -0.28
HPS1Q92902 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.29□□□□□ -0.28
HPS1Q92902 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.29□□□□□ -0.28
HPS1Q92902 RAB43P1-201ENST00000561790 589 ntBASIC13.29□□□□□ -0.28
HPS1Q92902 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HPS1Q92902 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC13.29□□□□□ -0.28
HPS1Q92902 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.29□□□□□ -0.28
HPS1Q92902 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 AC132938.2-201ENST00000579188 680 ntBASIC13.29□□□□□ -0.28
HPS1Q92902 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC13.29□□□□□ -0.28
HPS1Q92902 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.29□□□□□ -0.28
HPS1Q92902 AL591163.1-201ENST00000641757 987 ntBASIC13.29□□□□□ -0.28
HPS1Q92902 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.29□□□□□ -0.28
HPS1Q92902 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HPS1Q92902 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HPS1Q92902 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.29□□□□□ -0.28
HPS1Q92902 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HPS1Q92902 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HPS1Q92902 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HPS1Q92902 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms