Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 HLA-H-201ENST00000383620 1096 ntBASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 YBX2P1-201ENST00000394192 760 ntBASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 FO393414.2-201ENST00000405153 598 ntBASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 SLC25A1P1-201ENST00000528351 927 ntBASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 AL135744.1-201ENST00000565098 629 ntBASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 AL513190.1-201ENST00000621254 727 ntBASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 PAM-203ENST00000346918 3302 ntTSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 AL137783.1-201ENST00000623494 1896 ntBASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 DDX12P-201ENST00000432996 2947 ntBASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 UXT-AS1-201ENST00000590504 1525 ntBASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KCNIP4Q6PIL6 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 LINC01165-201ENST00000445190 1623 ntBASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 SLC6A4-203ENST00000401766 6543 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
KCNIP4Q6PIL6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms